Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1325 |
Symbol | rdhR |
ID | 8658250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1223678 |
End bp | 1224187 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003330752 |
Protein GI | 270308694 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.452176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAG AACTAGAGCT AAACCTTGGT CAGCTTCTGT TGATTTTGCT AGCTCAAACT AGCAAAATCC TAGATAAAAA ATATCAGAAA CAACTGAAGA AAATCGGTTT ACCTGGAGAA TATTTTGCAA TTCTTCATGA GATTGATTGT TTAGATGGGG AAGCTACCCC GCATGCAGTT GCCCGTACAA TGATTTTTGA ACCACACACC ATTTCTACGA ATATCTCCAA GATGGAACGC GAAGGGCTTG TCACAAAAAC AAAAAACATG AAATACAAGC ATATGGTTCG TATAGAAATC ACTGATAAAG GCAAGGCCTT ACTGGATGAA GCATGGAAAA TAATGTCCAA GACGGATGGT TATTGGAAAA CAGCCATTTC TGAAAGTGAA GTTAGACAAT TAATCTTATC ACTTACAAAA ATCCGAGATA AAAATATTTC TTCAGTTTTT AGTAACACAA AAAAACTCAC AGATTTCACA GTCAAAGGAC CCTTTTATGA TTCTGAGTAA
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Protein sequence | MSKELELNLG QLLLILLAQT SKILDKKYQK QLKKIGLPGE YFAILHEIDC LDGEATPHAV ARTMIFEPHT ISTNISKMER EGLVTKTKNM KYKHMVRIEI TDKGKALLDE AWKIMSKTDG YWKTAISESE VRQLILSLTK IRDKNISSVF SNTKKLTDFT VKGPFYDSE
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