Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1324 |
Symbol | rdhA |
ID | 8658249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 1221945 |
End bp | 1223426 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | reductive dehalogenase |
Protein accession | YP_003330751 |
Protein GI | 270308693 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0687887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCAAT TTCATAGTAC CTTGAGTCGG CGTGATTTTA TGAAGGCTTT GGGTTTGGCT GGTGCGGGTG TCGGAGCTAT GTCTGCCGCC ACATCTGTAT TTCATGACGT GGATGAATTA ACTACTGCCG GTACAGTACA GAAGCAGCCC TGGTGGGTTA AGGAGTGTGA TTTTAAAAAA CCGACTGTGC CTATTGACTG GCAGACTTTG CCTAAGATGG ATGGAATATT CCCCTACCAA TCTGCTCCCA CTTTGACTCC CCAGGAAAGG TTTGCTATGG GTATTCCCGG CGGTGCCGCA GGTACTTGGG CCAGCCCCGA GCAGTCGCAG GTGCTTCAAG ATTACATGAA GAAAGAATTT CCGGGTTGGG AACCGGGTTA TCTCGGTATG GGTGATAACC GAACAACTGC CTTGTTTATG GCTGCTCACT TTATGCGGAT GGGTATGTGG CCGGGTGAGA TACAAATGGG CGGCAAAAGG ATAAATGTTC AGGCTGCAAT ATTGAAAGCG GGTGGAACGC CTTTTTATTG GTCATTCCTT GGTCTGCGCT CAAGTGAAAC ACTTCGTCCG CAGGATTTTG GGGTACCGCG CTGGGAAGGG ACTCCTGAAG AAAACTTGCA GACCTTGCGT CAGGTTGTCC GTTTCTTTGG TGGTAATGAA GTAGGCGCAC AGGAATTGGA TGCTGATATA TTTAAGTTTT ACCATAAAAA GAACCTTGGA AAAGATTTGG TAATCGAAAA TGTAGACGAA CCTGAAGAAA CTGCTACCAA GATGGTAATT CCGTCTTCTG CCAAATACAT TCTCCAGTGG ACTGCCCGTC AACCGTATGA ATCAAGCAGA CGGCAGGCCG GTGAATATGA GGATGCTGCA GTTTACTGGG CTTATCAACG ATTCCCGCTG GTAACTGCCC TTATTCAGGA GTTTATTTAT GCCTTGGGAT ATAAGGTGGT TTCTACTCAC ATGACTGGTT ATCATACCAA TCCAATTGGT ACTTTAACTG GTATGGGTGA ACACTGCCGT ATGTCTTCTC CGGTTTTGAC CCCTAAATAT GGCACAACTA ATCGGGCTAT GTGGGTTATT ATAACTGATA TGCCTTTGGC ATCAACCAAA CCAGTGGATT TCGGCGTGTA CGAATTCTGC AAGACTTGCG GTATATGTGC AGATTCATGT CCCTTTGGGC TTATTGAAAA GGGAGAACCG TCATGGGAAG CCACCCAACC AGGTAGTCGC CCCGGTTTTA ACGGTTGGCG TACCAATACC ACTACCTGCC CTCACTGTCC TGTCTGTCAG GGCGCCTGCC CTTTCAATAC TGATGGTAAT GGCTCGTTTA TACATGAACT AGTCAGGGGT ACTGTTACTA ATACCACTGT CTTCAATAGT TTCTTTGCGA ATATGGAAAA GACCTTGGGT TATGGCCGCA AAGATCCACG GGATTGGTGG GATATGGAAG ATTACAGCTA CGGTATAAAC ACCAGGTACT AA
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Protein sequence | MSQFHSTLSR RDFMKALGLA GAGVGAMSAA TSVFHDVDEL TTAGTVQKQP WWVKECDFKK PTVPIDWQTL PKMDGIFPYQ SAPTLTPQER FAMGIPGGAA GTWASPEQSQ VLQDYMKKEF PGWEPGYLGM GDNRTTALFM AAHFMRMGMW PGEIQMGGKR INVQAAILKA GGTPFYWSFL GLRSSETLRP QDFGVPRWEG TPEENLQTLR QVVRFFGGNE VGAQELDADI FKFYHKKNLG KDLVIENVDE PEETATKMVI PSSAKYILQW TARQPYESSR RQAGEYEDAA VYWAYQRFPL VTALIQEFIY ALGYKVVSTH MTGYHTNPIG TLTGMGEHCR MSSPVLTPKY GTTNRAMWVI ITDMPLASTK PVDFGVYEFC KTCGICADSC PFGLIEKGEP SWEATQPGSR PGFNGWRTNT TTCPHCPVCQ GACPFNTDGN GSFIHELVRG TVTNTTVFNS FFANMEKTLG YGRKDPRDWW DMEDYSYGIN TRY
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