Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1321 |
Symbol | rdhC |
ID | 8658246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1219569 |
End bp | 1220702 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | sensor histidine kinase |
Protein accession | YP_003330748 |
Protein GI | 270308690 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCAATA AATACAAAAG ATTTTTTGAT AATGCATATG ACGGATTTGC AATTTTAGAT CTATCTCTCC CCTTTGAGGT TACAAGGCAT TTAGATGTAA ATCAACAGTT CTGTGATATG CTCGGCTATA CAAAAAGTGA GGTCCTTGCT TTGGGGCCTA TTGGTTTAAT CCATCCAAAT TCCAGAGAAA CGGTGCGTAT GCATTTGCAA GGACATTATA ACAACACCCA AAGCCAGTCA TTCATGAAAT CTATATTTAT ACGAAAAGAT GGAACTGAAA TAAGTATAGA AAGCAAGCTA TTTAGTGAAA AAACTAAAAG TTACCATATC GTCTTCGGGG TTCATCGAGA TGTCACCAAA AAGTATTACA TGGAAAAAAC CATCAAAGAA CAATTAGCTA AAGAAGCTGC CTTGAGAAAA GAACTGGAAA CTCAGGCAAC TGAAAAGTCT AACTATATTC GTCTAATCGT ACACGAATTA AAAACACCTA TAACCGCTCT GCTAGCAGCA GTAGAGTTGT CCAAACAAAA TCAAGGATGT GAATTGCCGG AGTTGAGTCT TGATAATATA TATGATAGCG TGATCGCACT TGATAAAAGA GTAGACGATC TATCAAACTT GGCCAAGAGC CAGATGAACC TGCTTAAAAT AAGACCCGTC ATGCTAAATC TGGCAGACCT AATCAATCAA ATAGTTAATG TCAATAAACC CAGTTTCCAA CGCAAAGGGC AAGTCTTTAA TACAGATATC CAACCCGACC TACCCAACAT ATACGCAGAT AAAGAATGCC TTTTCTCCAT TCTTATGAAT CTTCTCTCAA ATGCTGGTAA ATATTGCGGC AAGAATGGCA AGGTATCACT AAATATTAAA CAATTTGGAG ACGATATACT CTTCGAAATA GCAGATAATG GCATAGGAAT AGAACCTAAC AACCTCGAAC GTATTTTTGA TCCCTATGAT AGGATTAAGC GAATCAGCAA GACTTACAGT GGTTTAGGAT TAGGTCTATT TTTGAGCAAA ACATTTATAG AATTGCATGG AGGGAAAATC TGGGTAGACA GTGTCCTCGG AGTTGGTAGC AAGTTTAGTT TCACCATACC TAACCGACAA CCACCGCAAA GTGTAGAAGA ATGA
|
Protein sequence | MFNKYKRFFD NAYDGFAILD LSLPFEVTRH LDVNQQFCDM LGYTKSEVLA LGPIGLIHPN SRETVRMHLQ GHYNNTQSQS FMKSIFIRKD GTEISIESKL FSEKTKSYHI VFGVHRDVTK KYYMEKTIKE QLAKEAALRK ELETQATEKS NYIRLIVHEL KTPITALLAA VELSKQNQGC ELPELSLDNI YDSVIALDKR VDDLSNLAKS QMNLLKIRPV MLNLADLINQ IVNVNKPSFQ RKGQVFNTDI QPDLPNIYAD KECLFSILMN LLSNAGKYCG KNGKVSLNIK QFGDDILFEI ADNGIGIEPN NLERIFDPYD RIKRISKTYS GLGLGLFLSK TFIELHGGKI WVDSVLGVGS KFSFTIPNRQ PPQSVEE
|
| |