Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1312 |
Symbol | rdhC |
ID | 8658237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 1209090 |
End bp | 1210622 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | sensor histidine kinase |
Protein accession | YP_003330739 |
Protein GI | 270308681 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAGG AATCTATTTA TAATGCTATT TTTTGTGGTC TAAAAAATGG GATCGTACTA ATTGATAGAT ATTCCGGAAC TATTATGGAT TGTAATCCCG AGTTTGAAAA TATATCAGGT AGAACAAAAA TTCAGCTTAT TAGTATGAAG ATTTGGGATT TGATCACTAT TGAGGATAAT GAAGAAGTAG TGGCTTTTTT CAATCAAATA TCAACAACAG GAGACGGAAA ATCTAACGCT GTTGTACTGG AGAAGGTTGA CGGATCAAGA ATTACAGTAG AATTTAACGC TAATACAATT ATTAACTCTG GGCAAGAGTA TCTTTGTACT ATAGTGAGAG ATATTACTTT GCAAAGGAAG TTGGAAGAAC AGTTGCAAAG TAATTTAGAT CTCTTAAAAA ACGTGTTTGA TAATATGTCA GAACGTGTTG CGATTGTTGA TTATAATATG AGGTATATTT ATCGTAATAA AGGGTACTTT CCGTTTAATA TTCCTGATGC CGAAGAAGTA ATCGGGAAAA GCATTATGGA CATTTATCCA ACCGTCGAAA ACAGTGATGG TTATAAAATG TCCTGTAAAT GTATGAATGA TAGATTAGCA GGATCTTGCG AAAGCTGTGT AATAGTTAAT GATAAATCCT ATTGGCTTCG ATATTATTTT CAGCCAATTA AAGAAGGGTT ACTTATAGTA ATCACTGATA TTACTGAGCA TAAATTAGCC AACCAAAGAC TATCGCAAAT AAAAGATGAG TTAGAAAAAA CAATAGAGAA ACGTCACCTT GAATTAATCC ATTTGAATGA AAAATTAAAA ATAGAGGTAA ATGAGCGTAA GAATATCGAA TATAAACTCG AAAATGAGAT GAGTCGACGT GAGTACTTCA CGCGTGCATT GGTACATGAA TTAAAAACAC CACTTACTGC GATAATTTCT TCAAGTGAAG GTTTGCAGAA TGATATTAAG CGAGAAACGG CAAAGAAGTT TGCTAAAAAT ATTCAAGATG GAGCTTCCAC ATTAAATAGA AGGATTGATG AACTTTTAGA TATTACAAAA GGTGAGATTG GAATCTTAAA TATACATATA AAACCGATGG ATATTAAGAA AAGTTTAGAA AAAGTTCTCG ATAGTGTTTC TCCGGAAATT CAACGAAGAA ATCAAACATT TGTATTAAGC TTACCTGCTT TTTTACCGTT AATAAAAGCC GATGAGGAGC GTTTTCAACA GGTTGTAATA AACCTGATAA ACAATGCATT GAAATTCAAT AAAGACTATG GCAGGATATT TATTGAAGTG AGAAATGGTG ATGCCTCTGT AATATTCACT GTGCGTGATG AAGGTTTGGG TGTAAGGGAA GAGGATTATG AGAATATATT CATGCCTTAC TTCTGTGTAA AAAATATTAA GTCAATTGAT GCCGGTGGAT TAGGGTTAGG GTTGGCTCTT TCAAAAATGT TAGTAGAATT GCATGGTGGG AAAATATGGG TGGAGAACCA TGAAGACGGA GGTGCTATTT TGGGATTCTC CTTGCCAGTT TAA
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Protein sequence | MSKESIYNAI FCGLKNGIVL IDRYSGTIMD CNPEFENISG RTKIQLISMK IWDLITIEDN EEVVAFFNQI STTGDGKSNA VVLEKVDGSR ITVEFNANTI INSGQEYLCT IVRDITLQRK LEEQLQSNLD LLKNVFDNMS ERVAIVDYNM RYIYRNKGYF PFNIPDAEEV IGKSIMDIYP TVENSDGYKM SCKCMNDRLA GSCESCVIVN DKSYWLRYYF QPIKEGLLIV ITDITEHKLA NQRLSQIKDE LEKTIEKRHL ELIHLNEKLK IEVNERKNIE YKLENEMSRR EYFTRALVHE LKTPLTAIIS SSEGLQNDIK RETAKKFAKN IQDGASTLNR RIDELLDITK GEIGILNIHI KPMDIKKSLE KVLDSVSPEI QRRNQTFVLS LPAFLPLIKA DEERFQQVVI NLINNALKFN KDYGRIFIEV RNGDASVIFT VRDEGLGVRE EDYENIFMPY FCVKNIKSID AGGLGLGLAL SKMLVELHGG KIWVENHEDG GAILGFSLPV
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