| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1308 |
|---|
| Symbol | rdhA |
|---|
| ID | 8658233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 1205994 |
|---|
| End bp | 1206443 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | reductive dehalogenase |
|---|
| Protein accession | YP_003330735 |
|---|
| Protein GI | 270308677 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTTT GTGATCGTTG TCTAACTGAC CTGCCACTCG CACCCACCAA ACCAATAGAT
GCAGGCATCA ATAAATTCTG TGAAACCTGC GGTATCTGTG CTGAGGAGTG TCCCTTTGGT
TCTCTAAGTA AAGGAGGTTC TTCTTGGGAT CATTTTTTAT CCAATGAGCC TCTCGGTAAT
GGAAACGCTC CTGGTTTTAA GGGCTGGCGT TTAGATCTTC ATAAGTGTAA TTATTGTGGT
ATTTGCCAGT CAGCGTGTCC TTTTAATTCC GTTGATAACT CATGGGTGCA CAGCCTAATT
AAATCAACTG TGGGCACAAC ATCCATATTT AATGGTTTCT TTGCAAATAT GGAAAAGAAC
TTTAATTATG GCTTTCATAA TCCTGAGAAC TGGTGGGACA TGGAACAGCC GGTATTCGGC
ATCAAAAAAG AATGGTTAGG AGGCGACTAA
|
|---|
| Protein sequence | MRVCDRCLTD LPLAPTKPID AGINKFCETC GICAEECPFG SLSKGGSSWD HFLSNEPLGN
GNAPGFKGWR LDLHKCNYCG ICQSACPFNS VDNSWVHSLI KSTVGTTSIF NGFFANMEKN
FNYGFHNPEN WWDMEQPVFG IKKEWLGGD
|
|---|
| |