Gene DhcVS_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_1292 
Symbol 
ID8658218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp1189131 
End bp1190783 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content46% 
IMG OID 
ProductssrA integrase 
Protein accessionYP_003330720 
Protein GI270308662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00290655 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAGT GCAAGAGAGC AGTTGCCTAT GTTAGGGTAT CTTCGGTTTC TCAGGTAGAA 
GGTTACTCAT TAGATGCTCA GGAAAGACTC TTTACTGAAC TCTGTAAAAA CCGGGGATGG
CAGTCAGTCC GTATATACCG GGAAGAAGGC AAGTCTGCCC ATGTGGACAG CATTCACAAG
CGCCCCGTTT TCAGAAAGCT TTTAGAAGAT GCGGCTAAAG ATGAGTTTGA TGTTGTAGTT
GTCCATACCC TTGACCGCTG GTCAAGGAAT CTTACAGTTA CCCTTGAATC ATTAAAGATT
CTGGGTAAAC ATGGAATAGG GCTGGTTTCT ATAGTAGAAA ATCTGGATTA CTCCAAGCCG
GATGGCATAC TTTTCACTCA GATGCTGGGG GCATTTGCCC AGTACTTCAG CGAAGCTCTG
AGTACTCATG TCAGGAAAGG ACTTGACCAG AGAGCGTATG AAGGCAAACA CAACGGGAGC
ATACCCTTTG GCTATGAATC CTGTTGGGAG ACAAATGAAA AGGGAGAAAA GAAACAACGC
TGTGAGCCGG AACACCAAAG TGGTACCCAT ATCCATCCCA AAGAAGGGCA AGCTGCAGAA
GGGTTATTTA GACGCTATTC CTCCGGTACA ACCACCCTAT CGCAACTGGC TGTTTGGTTA
AATGAACAGG GCTTCCGTAC TAGGAATACC AAGAACCTGC CCGATGCCAA CGGCAATCTG
GTTTCAGGAC CAAGACTCTT CACCAGTTCC TCAGTCAGAA GTATCCTGCA TAATCCATTC
TATACCGGGC AGATAAACCA CCGGGGAAAA CTGATGCCCG GTGCTCATGA GGCCTTAATC
AGTCAGGAAT TATTTGACTT GGTCCAGCTA ACCTTGAGGA AAAACTCCGG CCGCTCTGAA
ACCCTCAAAA CATTACCTGA CAGGGAATAT TTGCTTAAAG GGTTGGTAAG ATGTTCACAT
TGCGGAATGC CCATGTGGGC ACAAACCTAT AAGAGTGGCA AGAGCTACTA CCGTGAGCAC
AAAGCTTCAA GGAGTATCAA AGAATGTCCG GGTCATGGCG GTACAATAGC CTGCCAAGTT
ATAGATAAAC AGGTAAGGGA ACTGGTCTCA GCCATAGAGC TAGGACCAAG ATGGCTTGAG
GAAGTGTTAT CTATAATAAG TCTCAAAGAT GAAGTAGATC GGGTCAAGAA AGAAAGAGAT
CTGACTATAA CCAAACTCCA TCGTATGGCT AGAGTATTCA TGGATGGCCT TATACCGGAA
GAAGAATACT CAAGGCAGAA GAAACTCTTG GAACTCAGTC TGGAATCACT GGTTGTACCT
GACTATGACG CGGCTCAAGA AGCCGGGAAT CTTATTCTTA ACCTGTCATC GCTCTGGTCC
AAGGCCAACT TATCAGAGCA GAGAAAGATA CTCCTTACCA TGCTGGACGG GGTCTATGTG
GATGTGAAAG AGCATCGCTC GGTAATAGCA GTTAAAGCCA AGCCACCCTT CAGGCCTATC
TTTCAGGTGG CAGTTTCAAA GAAAGAATCT AAGATTCATA TTTTAAACGA GCCATTAAGT
CATGAACCTA GCGGCTCGTC CGTGTTTCTG GTGGAGACGG GGGAGGGTTG GACTCTCCCT
GAAACAATGG TGATGGGGTT TGCAGGATGT TAA
 
Protein sequence
MTECKRAVAY VRVSSVSQVE GYSLDAQERL FTELCKNRGW QSVRIYREEG KSAHVDSIHK 
RPVFRKLLED AAKDEFDVVV VHTLDRWSRN LTVTLESLKI LGKHGIGLVS IVENLDYSKP
DGILFTQMLG AFAQYFSEAL STHVRKGLDQ RAYEGKHNGS IPFGYESCWE TNEKGEKKQR
CEPEHQSGTH IHPKEGQAAE GLFRRYSSGT TTLSQLAVWL NEQGFRTRNT KNLPDANGNL
VSGPRLFTSS SVRSILHNPF YTGQINHRGK LMPGAHEALI SQELFDLVQL TLRKNSGRSE
TLKTLPDREY LLKGLVRCSH CGMPMWAQTY KSGKSYYREH KASRSIKECP GHGGTIACQV
IDKQVRELVS AIELGPRWLE EVLSIISLKD EVDRVKKERD LTITKLHRMA RVFMDGLIPE
EEYSRQKKLL ELSLESLVVP DYDAAQEAGN LILNLSSLWS KANLSEQRKI LLTMLDGVYV
DVKEHRSVIA VKAKPPFRPI FQVAVSKKES KIHILNEPLS HEPSGSSVFL VETGEGWTLP
ETMVMGFAGC