Gene DhcVS_1287 details

Gene Information

• Locus tag: DhcVS_1287
• ID: 8658213
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 1182283
• End bp: 1184388
• Gene Length: 2106 bp
• Protein Length: 701 aa
• Translation table: 11
• GC content: 45%
• Product: hypothetical protein
• Protein accession: YP_003330715
• Protein GI: 270308657

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGAAA AACTAAACGA AACAAAAAAA CATCTTGAAA AAGTATCAGG TCCGGACAAA 
AACGGCTGGT ACACTTCACT CTGCCCTTTT CACAATGATC AAACCACCCC AAACTTGAGA 
TTTACCGAAA ACGGTTTCTA TTGCCTGGCT TGTGGCGAGA AGGGCAGTCT CTCCAAATTA 
GCTAACAAGC TTGGGGTATC CTTTTATCCT GATTCATCAA CTAGTCACAA CAAGAAGATA 
TCCTCTATTT ACGACTATAG AGACGAAAAT AGCAAGCTCC TCTTCCAAGT GGTTCGCTAC 
ACGCCCAAAG CCTTCAATCA GAGACACCCT AATGGCAAAG GAGGCTGGAT ATACAATCTT 
AAAGGCGTCG CTCCAACCCC CTATCGACTT CCTGAACTCC TTAAAGCCCC GCTTGATGAG 
CTTATCTTTA TTACCGAAGG AGAAAAGGGC GTCGAATCAC TCATAGAACA CGGCTTGACA 
GCTACCTGTT CGCCTATGGG GGCAGGTAAA TGGCGAGGTG AGTATTCTTA CTACTTCACC 
TCCAGAAAAG CCGTTTTACT TCCCGATAAT GATGAACCGG GCAGGCGCCA CGCCGAGCAA 
GTTGCTTCTT CTCTTTATCC TATTGCTAAA GAAGTGAAGA TAGTAAGTCT TCCGGATCTA 
AACGAAAAAG AGGATGTCTA CGACTGGTTT GCAGGCGGTG GAACTAAAGG GAAGCTTTTT 
GAGCTTGTAT TGAATACACT TCCCTATACG CCGCCTGATC AAGCAGACCT TTCCTCACTC 
CTTGATGATA TCTCCATCTT TATCAGAAGA TATGTTGTAC TTTCATCTGA CCAGTTAGTA 
GCCGTTACCT TGTGGGTAGT GCACACCTAT CTGATAGATC ATGCCGATAC TACACCTTAT 
CTCAATATTC ACTCAGCTGA AAAGAGGTCA GGCAAAACAA GGCTGCTCGA AGTTCTAGAA 
GTGTTGGTAG CAAGTCCCTG GCTTACCGGG AGGGTAACTT CCGCGGTACT TGCCCGTAAG 
ATCGATGCCG AATGCCCGAC ACTGCTCCTT GATGAGTCAG ATGCCGCTTT CAAAGGCGAA 
AAGGAATATT CAGAAACACT CAGGGGAATA CTAAACAGCG GTTACCGCAG GGGAGGCAAG 
TCTTCCATAT GCGTGGGTAA AGGCGCCGAT ATAGGTTATA AAGACCTTTC TACCTTTTGC 
CCTAAGGCTA TAGCCGGTAT AGGCAAGCTT CCCTCAACTA TTGCTGATAG GAGCATACCT 
GTGCTCCTAA AGCGCAAAAT AGATAAAGAA AAGACAGAGA AGTTCCGCTT AAGAAGGGCA 
TGGAAAGAGG CAGAGGATTT AAGAGAACGC CTAGAGCTTT GCCGTGCTTT GAAGCTTACG 
GGTGAAGAAA TCGTTATCCC TGAAGAGCTT GATGACAGGG CTGCCGATTG TTGTGAGCCT 
CTACTTGTTA TTGCATGTTC CGCAGGGAAA GAATGGTTCG GTAAGGCGAC TGGAGCACTT 
ACTAACCTTA TGACAGGGGA AGAGAGACAG GACGACTCTC TCAATGTCCA GCTATTATCA 
GATATAAGAG AGATACTGGA AAATGAAGGT TTAGACAGGA TATCTTCTTC TGCCTTAACT 
GACTCACTCA AAGGTAGGGA AGAATCCCCC TGGAGCGAGC ACGGCGGCAT CAACCTCTCC 
CAGCGGAAAC TCTCAAAGAT GCTTAAGCCC TACGGCATAA AGAGCAAGCC GATACGCTCC 
GGAATTGATG TCTACAAGGG GTACCAGAAA GACGATTTTA GTGACGCTTT TAACCGTTAT 
CTCTCTATAA ACCCGCATCT AAGAGTTACA TCGGTTACAA CTAGCTTTGA GCCAAACGTA 
AAAGAAGTAC CTGTTTTATC CGTTACAAAT ACCTTAAAAA CAGCAAATGT AACCGATAAT 
CCCCAAAGCT ACGCCAATCG TAATGTAACC GATGTAACGG ATAAAAGTCG AAACAAGAGG 
AAAAGAGCTG TTTTCCCACT GCTTCCTTAC TCTCTTTCAA AGCAGTGGCA GGAGGCTTTC 
GACTTCGAAA AAGTGAAGGT AACTTGGGGC ACTGAACATG AAGAGGACCT AAGATGTGCA 
AACTAG 

 

Protein sequence

MIEKLNETKK HLEKVSGPDK NGWYTSLCPF HNDQTTPNLR FTENGFYCLA CGEKGSLSKL 
ANKLGVSFYP DSSTSHNKKI SSIYDYRDEN SKLLFQVVRY TPKAFNQRHP NGKGGWIYNL 
KGVAPTPYRL PELLKAPLDE LIFITEGEKG VESLIEHGLT ATCSPMGAGK WRGEYSYYFT 
SRKAVLLPDN DEPGRRHAEQ VASSLYPIAK EVKIVSLPDL NEKEDVYDWF AGGGTKGKLF 
ELVLNTLPYT PPDQADLSSL LDDISIFIRR YVVLSSDQLV AVTLWVVHTY LIDHADTTPY 
LNIHSAEKRS GKTRLLEVLE VLVASPWLTG RVTSAVLARK IDAECPTLLL DESDAAFKGE 
KEYSETLRGI LNSGYRRGGK SSICVGKGAD IGYKDLSTFC PKAIAGIGKL PSTIADRSIP 
VLLKRKIDKE KTEKFRLRRA WKEAEDLRER LELCRALKLT GEEIVIPEEL DDRAADCCEP 
LLVIACSAGK EWFGKATGAL TNLMTGEERQ DDSLNVQLLS DIREILENEG LDRISSSALT 
DSLKGREESP WSEHGGINLS QRKLSKMLKP YGIKSKPIRS GIDVYKGYQK DDFSDAFNRY 
LSINPHLRVT SVTTSFEPNV KEVPVLSVTN TLKTANVTDN PQSYANRNVT DVTDKSRNKR 
KRAVFPLLPY SLSKQWQEAF DFEKVKVTWG TEHEEDLRCA N