Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1277 |
Symbol | feoB |
ID | 8658203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 1174459 |
End bp | 1176189 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | Fe2+ transport system protein B |
Protein accession | YP_003330706 |
Protein GI | 270308648 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000691258 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAG TTTTGCTTTT CGGCAACCCG AATGTGGGTA AAAGTGTGGT CTTTACCCGC CTGACTGGCG TCCAAACCAT GTCTGCCAAT TATCCCGGTA CGACTGTAAC TTTCAGCCGT GGCCAGATGA AGCTGGGTGA TGAAATTGCC GAGGTTATAG ACGTACCCGG TTCTTATACT CTTGAACCCA CCTGTGAAGC GGAGACAGTG GCCAGAAAAA TGCTGGATGA AGTGGCGGCT GATAAAAAGG GTGAGGTAAT TATCCTGAAT GTGATAGATG CCACTAATCT GGAAAGAAAT TTGTATCTTA CCCAGCAGCT TCTGGAAAGG GGTTTGCCCA CTGTTATAGC TATGAATATG TGGGACGAAA CCCGCCACAA GGGTATAAAA ATAGATTTGG ATAAGCTTTC GGAAATACTG GAAGTGCCTA TAGCCCCCAC TTCCGCCACC AGCGGCGAGG GTATTAAACA GCTGGTTGTC CAGTTGCTTT CACCTGAAGT ACCGGTACTG GCCGTGCAGG GTCAGGACGA ACGCTGGCAG CGTATCGGCG GTATTATCCG TGAGGTTCAG CAGATAACCC ACCGTCACCA TACCATTGGA GAGAGGTTGG CGGATGCCAG TGTCAGCCCG GTTTTGGGTG TTCTAATGGC TGTGTTCATT ATGGCGGCAG TCTTTCTGGT GGTGCGGTTT GTGGGTGAGG GACTGATAGC GTATGTATTT GACCCCATTT TTAATAATCT GTTGGCACCG GTAGTCCATT CTTTGTCAGA TGCTTTGGGC GGCAGCGGTT TCCTGCACGG GCTGCTGGTG GGTGATGTAA GCGGCGGGGA AATAAACTTT AAAGAGTCTT TGGGGCTGCT TACCAGCGGA TTATACGTGC CGTTTGCCAT GGTTCTGCCT TACATAGTAG CCTTTTACCT GGTCTTGGGC ATACTGGAAG ATACCGGCTA TCTGCCCCGT CTGGCGGTGT TGCTGGATAA TGTAATGCAC CGTTTGGGGT TGCACGGGTT TGCCTTTATA CCTACCCTGC TGGGATTAGG CTGTAACGTG CCGGCTATTA TGGCTACCCG CAGTCTGGAA AGCAGACGTG AGCGCTTTAT TGCGGCTACA TTGGTTTCGG TAGCTGTGCC CTGTGTTTCC CTGCAGGCTA TGATAATAGG TATGCTGGGG GGATTCGGGA TAGGGTATGT TTTCCTGGTT TTCGGTACCC TGTTTGCAGT CTGGCTGGGG CTGGGTATGA TTCTCAACAA GATTACTCCC GGTTTCAGCC CGGAACTATT GCTGGAAGTG CCTCCCTACC GCCTGCCCCC TGCCAATTTG GTACTGAAAA AGCTGGCTTT TAGGATTAAA AGTTTTCTCA AGGAAGCTTT ACCCATAATA CTGGGGGTAG TGGCAGTTAT AAATATTCTT AATTTCACCA AGGTATTTGA TGTTATCGCC AAAGCGGCTG AACCGGTGGT GACCGGTATT CTGGGGTTGC CGTCTGATGC GGCTGTGCCT CTGGTGGTGG GTTTCCTGCG TAAAGATGCG GCTATGGCTC TTTTAGGTCC TTTGGATATG GGGCCTGAAC ATTTGGTGGT GGCCAGTCTG GTACTGGCCA TGCTCTTCCC CTGCATTGCA TCTCTGGTGA TACTTTTCCG CGAGCTGGGG CGGAAAGATG CCTTGAAATC AGTGCTGGTT ATGCTGGTTG CGGCTATAGG GGTGGGAGGA CTTATGAATC TTATCCTGTA A
|
Protein sequence | MKKVLLFGNP NVGKSVVFTR LTGVQTMSAN YPGTTVTFSR GQMKLGDEIA EVIDVPGSYT LEPTCEAETV ARKMLDEVAA DKKGEVIILN VIDATNLERN LYLTQQLLER GLPTVIAMNM WDETRHKGIK IDLDKLSEIL EVPIAPTSAT SGEGIKQLVV QLLSPEVPVL AVQGQDERWQ RIGGIIREVQ QITHRHHTIG ERLADASVSP VLGVLMAVFI MAAVFLVVRF VGEGLIAYVF DPIFNNLLAP VVHSLSDALG GSGFLHGLLV GDVSGGEINF KESLGLLTSG LYVPFAMVLP YIVAFYLVLG ILEDTGYLPR LAVLLDNVMH RLGLHGFAFI PTLLGLGCNV PAIMATRSLE SRRERFIAAT LVSVAVPCVS LQAMIIGMLG GFGIGYVFLV FGTLFAVWLG LGMILNKITP GFSPELLLEV PPYRLPPANL VLKKLAFRIK SFLKEALPII LGVVAVINIL NFTKVFDVIA KAAEPVVTGI LGLPSDAAVP LVVGFLRKDA AMALLGPLDM GPEHLVVASL VLAMLFPCIA SLVILFRELG RKDALKSVLV MLVAAIGVGG LMNLIL
|
| |