Gene DhcVS_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_1270 
SymbolddpA 
ID8658196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp1167587 
End bp1169215 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content50% 
IMG OID 
ProductABC-type dipeptide transport system, periplasmic component 
Protein accessionYP_003330699 
Protein GI270308641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.593504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGGGA ATTGGAAAAA ATTTAAGAAA GTGTGGCTGC TGGGTCTGGC GGCAGTGATA 
TCGCTGAGCC TGTTTGCCGC CTGTGAGCAG ATAACCCCGA ATGCCGATAA TACCGAGATT
GTTACCCTGA AGGTTGGTTC TACCAAACCT TTCAAGACTG CCAACCGCTT CAGTGACTAC
TGGTACGGGG TACTAACCAA TCTGACTACC CATGACAGCC TGATAAGGCT GGGGGATGAC
ATGTCCGTCA AGCCTTGGCT GGCCAAGTCA TGGACAGTGT CGGATGATGC CATGACATTT
GTCTTTACTA TTGTAGACAA TGCCTACTGG CATGACGGTA CCAAACTGAC GGCTGAGGAT
GTGGCCTTTT CAGTAGAGTA CTACCGTGAT TACATTGCGT CAGCCAGCTG GATGAAAGAT
GTTATAGAAG ATGTAAGCTT TTCGGGGGAT ACGGTTACCT TGAGTTTGTC TCGTCCTTAC
GGCAACCTCT TGACCGAGTT TATGACCTAT TCGGTTGTAC CCAAACATAT CTGGCAGGAT
GTGGACGACC CGCTTAAGTA TAACCAGCCG GATATGACAG TCGGTTCAGG CCCATTTGTA
TTTGAAAGTT TTGACCTTGC TTCCGGCAAG TTTATTTTCA AGGCTAACGA AGACTATTTT
CAGGGCAAGC CAACTGTTGA TCGCCTTGAA GTGGATATCT ACCAGAATAT GGATGCTTTA
GTTTTATCAC TGGCTAATGG TGATATAGAT ACCTGGTGGG ATTATTCGGG TACTTTTCCC
TATACCAGCA TACCCGCCCT GATAAAGTCA GGCAAAGTGG ATTTTGAGAC CAGCACCTAT
CTGGGTGTTC CGTCTGCATT GGGTTTTAAC CTTGAAGACG GCCCTGCCAG TGACATAAAT
GTCCGCAAGG CTATTGCCGC GGCTATAAAC TATCAGCAGA TAATAGAATA CTTTTATGCG
GGTTATGGCA GTGTGCCTAC CACTGGTTTT GTTCCCCCCA CCCACCCCAA CTACAATGCA
AATCTGCCTT CTTTGGCATA TAATCCTGCA GAGGCAAATG CCCTGCTGGA TGCGGCCGGG
TTGATGGATA CAGACGGGGA TGGCATTCGT GAAGATGCAT CCGGCCAGAA CATTTCCCTG
AGGCTGCTGG CCAGATCTGA TCAGTCTACC AATATGCGTC TGGCTGAAAT ACTGCGGGAT
GCCCTGTCTG AGATTGGGCT TGGGGTAGAA ATAAGGGCAC TTGACCTTTC GGCTTGGGCT
TCGGTGAAGG ATGCCCTTGA TTATAATATG GTTCTCTTCG GGGCTACTCC CTGGGGGACC
CTGATGCATG CCGGGCATGG TTCGGGCTAC TTTGATTCCA GACGTACCGG TCAGGGTGTT
TTGCACAATC TGGATGTGGC TGAATATCTG GCCGCCTGTG ATGCCAGACT GGCTACGGCT
GATCCTGCCC AGCAGGCTAT ACTGGACCTG CGGATACAGG AACTTACCGC CGAATATTTG
CCGGGTATTG CCCTGGCCTG GACAGAGAGT GTCTACCCCT ACCAGCAGGG TTGGTCAGGC
TGGGTGATAG ACAGTATCTA CGGAGGAGTT TTTAATGGCT TCTCCTTCTT GAGTGTTCGG
TCTCCCTAA
 
Protein sequence
MIGNWKKFKK VWLLGLAAVI SLSLFAACEQ ITPNADNTEI VTLKVGSTKP FKTANRFSDY 
WYGVLTNLTT HDSLIRLGDD MSVKPWLAKS WTVSDDAMTF VFTIVDNAYW HDGTKLTAED
VAFSVEYYRD YIASASWMKD VIEDVSFSGD TVTLSLSRPY GNLLTEFMTY SVVPKHIWQD
VDDPLKYNQP DMTVGSGPFV FESFDLASGK FIFKANEDYF QGKPTVDRLE VDIYQNMDAL
VLSLANGDID TWWDYSGTFP YTSIPALIKS GKVDFETSTY LGVPSALGFN LEDGPASDIN
VRKAIAAAIN YQQIIEYFYA GYGSVPTTGF VPPTHPNYNA NLPSLAYNPA EANALLDAAG
LMDTDGDGIR EDASGQNISL RLLARSDQST NMRLAEILRD ALSEIGLGVE IRALDLSAWA
SVKDALDYNM VLFGATPWGT LMHAGHGSGY FDSRRTGQGV LHNLDVAEYL AACDARLATA
DPAQQAILDL RIQELTAEYL PGIALAWTES VYPYQQGWSG WVIDSIYGGV FNGFSFLSVR
SP