| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1266 |
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| Symbol | appF |
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| ID | 8658192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 1163817 |
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| End bp | 1164752 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | ABC-type oligopeptide transport system, ATPase component |
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| Protein accession | YP_003330695 |
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| Protein GI | 270308637 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAAAAG CTGAAAACCT GTCAGTTAAT TTTGTAGTCA GACATAACCC TTTGGTACGC
CTTAAGCACC CGGACCATAC TATCAAGGCT GTTTCAGATG TGAGTATCAC ACTGGAAAAG
GGTGAAATAC TGGGGCTGGT AGGTGAGAGC GGCTCCGGTA AAACTACTCT GGCCAGAGCT
TTGGCAGGAT TGGTTCGCCC TTCTGCCGGC GTGGTTGAAT ACAAAGGGCA GGACCTGCAA
AAGATGGAAG ACCCTGAGTT CAAAAAGTAC CGCCGTGAAG TCCAGTTAAT GTTACAGGAC
TCGGATGCCA CTTTAGACCC CCGCATGAGG GTTACAGGGC TTCTGGAAGA ACCTCTAAAG
ATAAACCGTC ACTTAAACAA GGCTGAAATG CAGCAATCGG TTTCAGCCGT TATGGAGAAA
ACTTTTATTC CGCCTTCGCT TTCTGGCCGC TACCCGGTAG AACTATCCGG CGGGCAGCGT
CAGCGGGTGT CACTGGCCAG AACTATATTG GTAAGACCTG AAATAATAAT TGCTGATGAA
CCTTTAAGCG GGCTGGATAC TATTTTGCGT TACCAGCTGC TCAGGCTTAT GCTGGAGCTT
AAAGAAGAAT ATGGTTTGAG TTATCTGCTT ATTTCACATG ACCTGCAAAT GGTTAGTTCG
GTTTGCAGCC GTTTGGCGGT TATGTACCGA GGCAAGCTGG TTGAAGTGAT GGGGAAAGAA
AATATATCCC AGGCTGTTCA CCCTTATACC AAAATGCTTA TGGCAGGGCT GGCACTGGAG
CTTGAAGATG GGCACGACCT GCATCACCAT GACGAAGACG GATGCGGCTG CGGTTTTGCT
GGGCGCTGCC CGTTGCATCT GCCGGTTTGC CATCAGGAAG CGCCGCCTTT GAAGATGGTT
TACGAAAATC ACCTCTGTGC CTGCCATTTA ATCTGA
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| Protein sequence | MLKAENLSVN FVVRHNPLVR LKHPDHTIKA VSDVSITLEK GEILGLVGES GSGKTTLARA
LAGLVRPSAG VVEYKGQDLQ KMEDPEFKKY RREVQLMLQD SDATLDPRMR VTGLLEEPLK
INRHLNKAEM QQSVSAVMEK TFIPPSLSGR YPVELSGGQR QRVSLARTIL VRPEIIIADE
PLSGLDTILR YQLLRLMLEL KEEYGLSYLL ISHDLQMVSS VCSRLAVMYR GKLVEVMGKE
NISQAVHPYT KMLMAGLALE LEDGHDLHHH DEDGCGCGFA GRCPLHLPVC HQEAPPLKMV
YENHLCACHL I
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