Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1264 |
Symbol | rdhR |
ID | 8658190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1162546 |
End bp | 1163058 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003330693 |
Protein GI | 270308635 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCACA GACTAAGAAA AGACGGCTAC AAAATATGGT CAATTCTTAT GCAGGCCAGA ACGGCAGCCT ACCACGTACG CAGAAAAGAC CTGATGGAGT ATGGAGTTTC ACCGGAACAG GCAGGCATAC TGGAACGGCT TTACCACACT AAAGACAAAA CTATGACACC CACCCGCATA GCCGAGATTT TTTTACGTCA GCCCAACACT ATTACCGCCA TTTTGAGGGG CATGGAGAGA AAAGGGCTGG TTGAACTAAG CAAAGACCTG GAAAGAAAAA ACATGATTCG GGTCACCATT ACCGGAAAGG GCACTCAGCT AAGAGAGATT ATAAACACTA ATCTTGCTGA AACACGCAAA ATATTTGATG TCCTGTCTGA CGAGGAGTTG GAACTGCTGG AAAATATGCT CTTAAGAATA AGAGATAAAT CCATAACCCA AACTTCATCC TCCAAGTACA ATGCAAAACG CAAACTTGAG CAGATTCACG AATCTGACAG CCAGATACTC TGA
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Protein sequence | MTHRLRKDGY KIWSILMQAR TAAYHVRRKD LMEYGVSPEQ AGILERLYHT KDKTMTPTRI AEIFLRQPNT ITAILRGMER KGLVELSKDL ERKNMIRVTI TGKGTQLREI INTNLAETRK IFDVLSDEEL ELLENMLLRI RDKSITQTSS SKYNAKRKLE QIHESDSQIL
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