Gene DhcVS_1258 details

Gene Information

• Locus tag: DhcVS_1258
• Symbol: trpA
• ID: 8658185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 1157437
• End bp: 1158204
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 52%
• Product: tryptophan synthase alpha chain
• Protein accession: YP_003330688
• Protein GI: 270308630

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCGCA TCAGTGATGC ATTTAGCAAA CGCAAACCCC TTATAGCTTA CATAACAGTC 
GGCTATCCGG ATGTTGAAAC CACCTTGAAA CTGGTGCCTA TGCTGGAAGC AAACGGGGTG 
GATATTATAG AGCTGGGCAT TCCCTTTTCA GACCCCTTGG CAGACGGGGT CACTATTCAG 
AACGCCAGCT ACCAGGCACT TCAGAACGGG GTAACCCCTG AAGTCTGTTT ATCAGTTGCC 
GCCCGTTTAA AAGAAAAAAC CTCTATACCC ATGGTGTTTA TGGGGTATTA CAACCCGATT 
TACAATTACG GCCTGAGCGA ATTCTGCAAT AAGGCGGCCG CCGCCGGTAT AAGCGGCCTT 
ATTATTCCTG ACCTGCCGCC GGGTGAGGCC GAAGATATAG AAGCAGCCGC CAAAGAAGCC 
GGGCTGGATA TAATCTTCCT GTTAGCCCCC ACCAGCACAG ACGAACGGAT TAAACTGGTA 
GCCGCCAAAT CAGGGGGGTT TATCTACCTT GTTTCCCACT CAGGTGTTAC TGGGGCAACG 
AGCAACCTTC CGGCTGACCT CGGCAGTTTC GTAAGCAGGG TCAGGAAGGC CGCCAGCCAG 
CCTCTGGCAG TGGGTTTCGG CATTTCCACC CCCGAACAGA CCGCCGATAT CTCAAAATAT 
GCTGACGGGG TCATAGTAGG CAGCCGCATT ATCCAGCTGG TACAGGCAGA CCCATCACTT 
GAAAAGGTAA GCGGCTTTGT CAGGCAGCTA AGAAAGGCAC TTGACTAA 

 

Protein sequence

MSRISDAFSK RKPLIAYITV GYPDVETTLK LVPMLEANGV DIIELGIPFS DPLADGVTIQ 
NASYQALQNG VTPEVCLSVA ARLKEKTSIP MVFMGYYNPI YNYGLSEFCN KAAAAGISGL 
IIPDLPPGEA EDIEAAAKEA GLDIIFLLAP TSTDERIKLV AAKSGGFIYL VSHSGVTGAT 
SNLPADLGSF VSRVRKAASQ PLAVGFGIST PEQTADISKY ADGVIVGSRI IQLVQADPSL 
EKVSGFVRQL RKALD