| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1251 |
|---|
| Symbol | trpE |
|---|
| ID | 8658178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 1150736 |
|---|
| End bp | 1152193 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | anthranilate/para-aminobenzoate synthass component I |
|---|
| Protein accession | YP_003330681 |
|---|
| Protein GI | 270308623 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTATC CATCCTTAGC CGAAGTAAAA AAACTGGCTT CACAGGGTAA CCTGATACCC
ATCTCCCGTG AGATTGTGGC CGACCTTGAA ACCCCGGTTT CCGCCTTTCT GAAAATCAAG
ACCAGCCAAA ATGCTTTTCT GCTGGAAAGC GTGGAAGGCG GCGAAAGGGT AGCCCGGTAT
AGTTTCATCG GCGCTAACCC TTACAAAGTA ATCACCGCCT ATCAGACAGA TACCGTTCCC
CCTCTAAAGC AGGTTGAAAA CGAACTGAGT AAATACCGCT TGGTACAGGC GGGTGAGCTG
CCGCGTTTTT GCGGCGGGGC AGTGGGTTTT CTGGGTTATG AAGCAGTCAC CCGCTTTGAA
GAGCTGCCCT CTCCCGCATC AGACCCGTTA AACCTTCCGG AAGCGGTCTT CATGCTGGTA
GATACCATGC TGGTTTTTGA CCATATCAGC CACTCTATCA AGGTACTCAG CTATGTCCAT
ACAGAAGAGG ATATTGAAGC CTCTTATAAC AAAGCTATCC AAAATATAGA AAAGCTGATT
AGCCAGCTCA GACAGCCGCT TGCCAAAACA GAGTTAAAAC CCGCCCCCGC CGGTGTTCCT
GAAACAAAGT CCAATTTCAA ACAAACAGAT TTTGAGAGCA GGGTATCCAA AATAAGAGAT
TACCTTAACT CCGGTGAAGC CATTCAGGTA GTTTTGTCAC AGCGTCTGTC CAGACCCACC
TTGGCCCACC CCTTTGACAT TTACCGCGCC CTACGTTCGG TAAACCCTTC CCCATACATG
TATTACCTTG ATTTCGGTGA TTTCCAGATA GTAGGGGCAT CACCTGAGGT GCTGGTGCGG
GTGGAAGACG GCGAGGTTAT GACCCGCCCG CTGGCCGGCA CCAGAAAACG GGGCAAAACC
CAGGCAGAAG ATATCCGGCT TGAACAGGAG CTCCGCCAAG ACGAAAAGGA GTGCGCCGAA
CATATTATGC TGGTAGATTT AGGCAGAAAC GATATCGGCC GCATAAGCAG GCCCGGCACA
GTCCGCATAA CAGACGTAAT GGATGTGGAA CGCTACTCCC ACGTAATGCA TCTGGTTTCC
CATGTGCAGG GCAAACTGAA CGTGGATATC ACCCCGTTTG AGGCATTGCA GTCCTGCTTC
CCGGCAGGAA CAGTCTCCGG CGCACCTAAA ATACGGGCAA TGGAGATAAT TGCCGAAATG
GAAACCGAGA AACGGGGCAT CTATGCCGGG GCAGTGGGTT ACTTTTCCTA TTCGGGCAAT
ATGGACATGG CTATAGCCAT ACGCACCATG GTTGTCAAAG GCGGCGTTGC CCACGTCCAG
GCAGGCTGCG GAATTGTAAG TGACAGCGTA CCCGAATCTG AATATCAGGA AACACTGAAC
AAGGCTCAGG CCCTGCTGAA AGCCCTGGAC AGGGCAGAAA ATATGGCAAC GGAGAAACCG
CATGTTGTTA CTAATTGA
|
|---|
| Protein sequence | MYYPSLAEVK KLASQGNLIP ISREIVADLE TPVSAFLKIK TSQNAFLLES VEGGERVARY
SFIGANPYKV ITAYQTDTVP PLKQVENELS KYRLVQAGEL PRFCGGAVGF LGYEAVTRFE
ELPSPASDPL NLPEAVFMLV DTMLVFDHIS HSIKVLSYVH TEEDIEASYN KAIQNIEKLI
SQLRQPLAKT ELKPAPAGVP ETKSNFKQTD FESRVSKIRD YLNSGEAIQV VLSQRLSRPT
LAHPFDIYRA LRSVNPSPYM YYLDFGDFQI VGASPEVLVR VEDGEVMTRP LAGTRKRGKT
QAEDIRLEQE LRQDEKECAE HIMLVDLGRN DIGRISRPGT VRITDVMDVE RYSHVMHLVS
HVQGKLNVDI TPFEALQSCF PAGTVSGAPK IRAMEIIAEM ETEKRGIYAG AVGYFSYSGN
MDMAIAIRTM VVKGGVAHVQ AGCGIVSDSV PESEYQETLN KAQALLKALD RAENMATEKP
HVVTN
|
|---|
| |