Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1240 |
Symbol | radC2 |
ID | 8658168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 1142565 |
End bp | 1143392 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | DNA repair protein |
Protein accession | YP_003330675 |
Protein GI | 270308617 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.770366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGCC GGATGAACCC GCCCAAGAAG ACTGAAGATA TCTCATCTGT TTCACCGGCT AACCAAAACG CCGGGCATCG CCAGCGTCTG CGTGAGCGTT TTTTAAAGGC TGGTCTGGAC GGGCTGAATG ATTATGAAGT GGTGGAATTG CTGCTTACTC TGGGTACTCC CCGCCGTGAC TGCAAGCAAG CGGCCAAAGA GGCTATAAAA CACTTCGGCA GCCTTCGGGC GGTGCTGGAA GCCTCCCCTG CCGAACTCTT AAGCATAAAG GGAATAGGCG AGGTCAACTC CATGGCCCTT ACCCTTATCA GGGAAGTATC CCGGCGTTAC CTTAAGGACG GGATTATGGA AAAACCGGTC TGCAATACCG CCCAGCAGGT GTTTGATTAT CTGTATTGCG CCATGCGGGG TCTGAAAAAA GAGGTTTTCA AGGTAATATA TCTGGACAGC CAGCACCGGG TGCTGGAGTT GGCAGACCTT TTTACCGGAA CAGTGGCCAG CGGCAGCATA GTCCCCCGTG AGGTTATTGC GGCGGCTATT TCCCAAAATG CCTCTGCCCT TATTTTTGTC CATAATCACC CTTCGGGCAA GATCGAACCT TCACAGGCGG ATAAAGACGT AACCCGTGAG CTGGTATATG CCGCTATGGT GATGAAGATA CGGGCTTTAG ACCACATAAT TATCGGGGAT AACTGCTATT TCAGTTTTGC GGCTGCCGGT ATAATGAGTG AGTACGAAAC AGGTTTTCTG AATTTGAAAC TGAAACATGT TTCCGAAGCC AGACGCCATA TATACAGGGC AGAACTGTTC GGGGGAAACC CGGAGTAA
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Protein sequence | MKSRMNPPKK TEDISSVSPA NQNAGHRQRL RERFLKAGLD GLNDYEVVEL LLTLGTPRRD CKQAAKEAIK HFGSLRAVLE ASPAELLSIK GIGEVNSMAL TLIREVSRRY LKDGIMEKPV CNTAQQVFDY LYCAMRGLKK EVFKVIYLDS QHRVLELADL FTGTVASGSI VPREVIAAAI SQNASALIFV HNHPSGKIEP SQADKDVTRE LVYAAMVMKI RALDHIIIGD NCYFSFAAAG IMSEYETGFL NLKLKHVSEA RRHIYRAELF GGNPE
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