Gene DhcVS_1232 details

Gene Information

• Locus tag: DhcVS_1232
• Symbol: rpiY
• ID: 8658160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 1137878
• End bp: 1138534
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 48%
• Product: ribosomal protein L25 (general stress protein Ctc)
• Protein accession: YP_003330667
• Protein GI: 270308609

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.0660333
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGGTA TCAGCCTGGC ACTTAATTCA CGGCAGATCT TTGGCAACAA AAACAAACTC 
CTTAGGGCTC AGGGACTGAC CCCTGTCCAC ATCTTTGGTC ACGGGCTGCC GTCACTGGCA 
CTTCAGGCAA ACACTCTGGA ACTGGAATCC ACAATCAATC GGGCAGGCAG TTCCCACCTG 
GTAAATATCA AACTGGATAC AGACAAGAAA ACCCGCAAAG CCTTTATCCG TGAAATCCAG 
CGCCACCCGA TAAAAGGCTA CCTTCAGCAT GTAGATTTTT ACCAGATAAA CCTAAAAGAG 
AAAGTAACTG CAGAAATCCC CATCCATTTC AGCGGAGAAT CACCCTTGCT CAAAGAAAAA 
GGCCACAAAC TGACCGCCCC CTTTACACAC CTTACAGTTG AAGCCCTGCC GGATGACCTG 
CCGCCTGAAA TACATATTGA CCTCTCACAG TTTGATACTC TGGAGAAAGA CCTTTACATA 
AAAGATATCA TCCTGCCAGG CAAAGCCAGA ATCCTAAACG AGCCTGACCT CCTGGTTGCC 
AAAGTAAGCG AAATCCACCT GAAGGTTGAA GCGCCAGTGG CGGTCAGTCT GGCTGAAGAA 
CCGGAAGTAA AGCCTGTAGT CCATACTGAA GAAAAAGAAA CCACTGAAAA GGAATAA 

 

Protein sequence

MTGISLALNS RQIFGNKNKL LRAQGLTPVH IFGHGLPSLA LQANTLELES TINRAGSSHL 
VNIKLDTDKK TRKAFIREIQ RHPIKGYLQH VDFYQINLKE KVTAEIPIHF SGESPLLKEK 
GHKLTAPFTH LTVEALPDDL PPEIHIDLSQ FDTLEKDLYI KDIILPGKAR ILNEPDLLVA 
KVSEIHLKVE APVAVSLAEE PEVKPVVHTE EKETTEKE