Gene DhcVS_1218 details

Gene Information

• Locus tag: DhcVS_1218
• ID: 8658146
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 1131283
• End bp: 1131903
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 47%
• Product: transcriptional regulator, TetR family
• Protein accession: YP_003330658
• Protein GI: 270308600

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACAAAG CAGTCAAAGC GGAAACCCGC AAAATACAGG CTGAAAAACG CCGCCAGGAA 
ATACTGGACG CTGCCCTAAA GGTATTTGCC GAACAAGGCT ACCAGGGGGC AACTATCAGC 
CAGATATCCG AAGCAGCTGG AACATCTCTG GGACTGCTTT ACCATTATTT TCCCAATAAA 
AAGGCCCTGA TGGAGTCGGT AATAGCCGAA AATAGTTTCC TCCCCTTGTT AAAAAAAATA 
CTCGGCAAAC CCGGCGACCA GAATATACAG ACTGTCCTGA CAGAATTATG CACAGGGTTT 
TACCGCCTGT TGGAAGAAAA AAAGGAACTG GTGGTTGTTT TTCTACGGGA AGGAACCAGC 
AATCAAACTG TCCGCCAAGT ATGGTTCGGT ATGCTTGCCC AAGGAGCTCT CTCCATTAAA 
AAATTTCTTG ACCAATATGT GGAACGGGGA GTGCTGAAAA CTCACGCTAC CGACGTTTCC 
GCCCGCAGCC TCATGTCAGC AATAGTAATG CTCTACCTGA CTAACGAAGC TTTCGGTGAC 
GGATTTGCCA AGCCTGCTGA ATTTATAACC CAGATGGTAG CTAACCAGCT TAATGGTATA 
GAAGCCCGCC AAAAAGAATA G 

 

Protein sequence

MHKAVKAETR KIQAEKRRQE ILDAALKVFA EQGYQGATIS QISEAAGTSL GLLYHYFPNK 
KALMESVIAE NSFLPLLKKI LGKPGDQNIQ TVLTELCTGF YRLLEEKKEL VVVFLREGTS 
NQTVRQVWFG MLAQGALSIK KFLDQYVERG VLKTHATDVS ARSLMSAIVM LYLTNEAFGD 
GFAKPAEFIT QMVANQLNGI EARQKE