| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1194 |
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| Symbol | clp |
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| ID | 8658122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 1105190 |
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| End bp | 1107628 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | ATP-dependent Clp protease ATP-binding subunit |
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| Protein accession | YP_003330634 |
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| Protein GI | 270308576 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.453766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGACAGG AGAAATTTAC CGAACAAGCC CAGGAAGCAC TCAGCGCTTC ACAGTTGCTG
GTGCAAGAAT ATCAGCACAG CCAATGGGAT GTGGAACATG TGCTGCTGGC CCTTATCCGT
CAGGAAAAAG GACTGGTGGG TGAAATAATA AAAGAACTCA AAGTAAGCTC AGAGGAGATA
ACCAAGCAGC TGGCAGAAGC TTTAAAACGT TCGCCCAAAG CAGTAGGCGG CAACATCCAG
ATATACCCCA CCCCCCGCAT TATCAGCCTG CTGCAAACCG CCAATAACGA AGCAGACCGC
CTGCGGGACG AATTTATAGG GACAGAACAC TTGCTGGTAG CTATAGCAGG AGATACCCAG
GGAGAATCCG CCCGAATTTT GAAGCAGTTT GGTATTGACC AGGAAAAAGT ATATTCCGCT
CTCCAAAAAA TACGGGGCGG ACACCGGGTG ACCGATGCCA GAGCTGAAAG CAAATACAGG
GCACTGGCTA AATACAGCCG TGATTTAACT GAACTTGCCA AACAGAACAA AATAGACCCG
GTAATAGGCC GCGACCAGGA AATCCGCCGG GTTATGCAGA TACTCTCCCG CCGCACCAAA
AACAACCCGG TCATTGTGGG GGAAGCTGGT GTTGGTAAAA CCGCCATTGC CGAAGGGGTT
GCCCAGAAAA TTGCGGATAA TGACGTACCC GAATCCTTGC GTGACCGCAA GGTAATGGCC
CTGGACATGG GCGCTTTGGT TGCCGGAAGC AAGTTCCGCG GGGAGTTTGA AGAACGCCTC
AAGGCCGTGA TGGACGAGGT GCGGCAATCC GCCGGTGAAA TTATTCTTTT CATAGACGAA
ATCCATACCG TAGTCGGGGC AGGAGCGGCT GAGGGGGCTA TAGATGCCTC AAACATGCTC
AAACCGGCAT TATCCAGGGG TGAACTCCAG ACAATAGGGG CTACCACTCT GGATGATTAC
CGCAAATATA TAGAGAAAGA CACTGCTCTG GAACGCCGTT TCCAGCCGGT ATTTGTAGAA
GAACCCTCAG TCGACCAAAC TATCGAGATA TTAAAGGGTA TCAGACCCAA GTACGAAGCC
CACCACAAGC TGAAGATAAG CGATGCCGCA CTGGAAGCAG CCGTCAGGCT GTCCAGCCGC
TATATTACGG AGCGCCAGCT GCCTGACAAG GCCATAGACC TTATTGACGA AGCCGCAAGC
AAACTCCGTC TGGATAGCGA AAGTGCCCCG CCGGAAGTAA AGAAACTGGA AAATGAACTC
CGCCAGACAG GCATTGAGGA AGAAGCAGCT TCTCAGTTGC AGGAATACGA AAAAGCGGCC
GAACTCAAAG CCGAAAAGAT GCGTCTGGAA GAGAAATTCA ATACAGCCCG TGAGGAATGG
CTGAAACAGG AAAAAATTGC CGAAGAAGTC ACTGCCGAGC AGATAACGGC ACTGGTTTCA
TCTATGACTG GCATACCAGT CAGCCAGATG CTGGAAGGTG AAGCTTCCAA ACTGCTGAAT
ATGGAAGACC GCATACACGA GCGTATGGTA GACCAGGAAG AGGCAGTAAA AGCCGTAGCT
GAAGCTATCC GCCGCAGCCG GGCAGGGCTC AAAGACCCGC GCCGCCCAAT AGGCAGTTTC
CTATTTTTAG GCCCTACCGG CGTAGGCAAA ACCGAACTGG CACGCAGTTT AGCATGGTTT
TTATTTGATG ATGAAACCGC TATGGTCAGG CTGGATATGT CTGAATACCA GGAAAAACAC
ACTGTCTCCC GTCTGGTAGG TGCACCTCCC GGATATGTGG GCTACGACGA AGGCGGGCAG
CTTACCGAAC TGGTCCGCCG CCGCCCGTAC CGGGTTATCC TGCTGGACGA GATTGAAAAA
GCCCACCCGG ATGTATACAA CACCCTGCTC CAACTTCTGG ATGACGGCCG TCTGACGGAC
GGGCAGGGCA GAACGGTGGA TTTTAAAAAC ACGGTTATCA TCATGACTTC CAACGCAGGT
ATAGAAACTA TAAAACGCGA ATCTGCCTTG GGTTTTGCCA TCAGGAATGA TGACTCCAAG
ACCCGGCAGG ACAGCTATGA ACGCATGAAA GACAAGGTCA TGGCCGAGGT TAAAAAGACC
TTCCGTCCGG AGTTTATAAA CCGGGTGGAT GAAATAATTG TCTTCCACGA GCTGGCTGAA
GAACAGATAC GCAAGATAGT AGATTTCATG ATAAAAGATG TCTCCAAACG CCTTGATGAA
CGCAAACTCA AGCTGGAGCT GACCGATGCC GCCAAGGGCT GGCTGGCCAA GGTAGGGTAT
GACCCGGCCT TTGGTGCCAG ACCCCTTCGC AGAGCCATTG AAAGATACAT TGAAAGCCCG
CTGGCTGGCA AGCTGCTTCG CAATGAGTTT AGTGAAAATG CTACAATACT GGTGGACAAG
GCGGATGAAG CTCTGAGCTT CAGCCAGAAG ACCGCCTGA
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| Protein sequence | MRQEKFTEQA QEALSASQLL VQEYQHSQWD VEHVLLALIR QEKGLVGEII KELKVSSEEI
TKQLAEALKR SPKAVGGNIQ IYPTPRIISL LQTANNEADR LRDEFIGTEH LLVAIAGDTQ
GESARILKQF GIDQEKVYSA LQKIRGGHRV TDARAESKYR ALAKYSRDLT ELAKQNKIDP
VIGRDQEIRR VMQILSRRTK NNPVIVGEAG VGKTAIAEGV AQKIADNDVP ESLRDRKVMA
LDMGALVAGS KFRGEFEERL KAVMDEVRQS AGEIILFIDE IHTVVGAGAA EGAIDASNML
KPALSRGELQ TIGATTLDDY RKYIEKDTAL ERRFQPVFVE EPSVDQTIEI LKGIRPKYEA
HHKLKISDAA LEAAVRLSSR YITERQLPDK AIDLIDEAAS KLRLDSESAP PEVKKLENEL
RQTGIEEEAA SQLQEYEKAA ELKAEKMRLE EKFNTAREEW LKQEKIAEEV TAEQITALVS
SMTGIPVSQM LEGEASKLLN MEDRIHERMV DQEEAVKAVA EAIRRSRAGL KDPRRPIGSF
LFLGPTGVGK TELARSLAWF LFDDETAMVR LDMSEYQEKH TVSRLVGAPP GYVGYDEGGQ
LTELVRRRPY RVILLDEIEK AHPDVYNTLL QLLDDGRLTD GQGRTVDFKN TVIIMTSNAG
IETIKRESAL GFAIRNDDSK TRQDSYERMK DKVMAEVKKT FRPEFINRVD EIIVFHELAE
EQIRKIVDFM IKDVSKRLDE RKLKLELTDA AKGWLAKVGY DPAFGARPLR RAIERYIESP
LAGKLLRNEF SENATILVDK ADEALSFSQK TA
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