| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1188 |
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| Symbol | |
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| ID | 8658116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 1096558 |
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| End bp | 1099578 |
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| Gene Length | 3021 bp |
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| Protein Length | 1006 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | BNR/Asp-box repeat domain protein |
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| Protein accession | YP_003330628 |
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| Protein GI | 270308570 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00105503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCTTT CCATGTTCAC AGTCGCTGCC CCCGTAGCTG CTGCCAACCA GGATTGGAGC
AAAATCTCCC TGCCCGGCTC CGGCGCAACC GGCGGCTATG TAGTCAGCAC TCCTAGCGTT
CGCTTTGACA ACATCGGCAT TTTGGAATGG AACGCAGATA AATCTGCTGT CTATGCCACT
GCCGAGTATG ATGGAGTTAT GTGTGTATTT AAATCTACTG ACTCCGGTCG CTCTTGGAAG
ATGGTCTTTG AAGACGGTGC TGTTTATACT TTGGCAGCTA GTGGCCGTAT TTTTGATATG
GTCGCTTCTA GCGTTAATGC CAATGAAGTT TACTTCACTG ACGGTCATGA CATCTTTACC
ACCAAAGATG GTGGTGCAAC TTGGAACAAA ATGTCAAACC TTTATACTTA TGCGGCTTCC
AATTTTGTAA CAGCTATTCC TACTGGTATC ATTGTTACTT TGGACACCGC TGTAGTTGGC
GCTACTAAAT ACATCTTTGC AGGTACTGCT TCCCTTGGCG TAGCTCCGGG CGCTAACGGC
GTGTATATGT GCCAGGAAAC CGCCTTCGGT ATGTCTTGGA CCGATCTTGA TGTTATTAAT
CAACGTGAAA CCGCTTGGGG TGGTTGTAAT GTTTGGGATG TAGTTGTTGA TCCCACTGAC
TTCGCCACCA AACAGGGTGT TATTGCTGTT GCTGAAGACA CCACTGTGGG TTCCGAAGCT
ACTTACATAA CCGCCAAATA TTTTGGCAAC CAGTGGAATA TGCCTTCGAC CTGCATTGAT
ACCGCAGTCG AAGAAAACAA CACTGATTCT ATCACCGGTA TTTACCATGC CGAACTCTGG
CTGCCCTCTG ACTTCAACTC CAACGTAGCC TCCGGCAAAT TCCAGGGTTG GCTTGCTCTG
CAGACTTCTG CTGGTCAAGG TGATGTGTAT TTGTGGTATG GTAATACCTT AACAACCATA
GACCTTAACG TCCGTGGTTA TTCTGCTGGT GTTGGCACTG CTACAGAAGT AACCGATATT
GATGGTATTG GCGGTATTGC TGATGCCAGA TTGATTATTG GTGGTTATAA TATCGCAACT
GCTTCTGCAC CTCTTACTTG GTATTCTTCT GATCGCCTTA CCTTCTCAGC TAATGTTAAA
GCCCCTACCG GTGCTGCAAG CTCTTGGGGT CTCTCTGTTG CTACTGTAAC CGTACTTGCC
ATGGGTGACT ACAATACTTC CGGCAAGGCT CTTGCTGGCA CTGCTGGCTG GGATTGTGGC
GTTTCTTACA CAGCTGATTT TGGCAAAACT TGGAATACTA TTTCCATGAT GCGTCAGGCT
ATTGTTAGCG TTGACAATAT GGCTGGTAAT TTATTTATTG TTACTAGTGA TTATGCCGAA
GAGAGCGTTT GGCGTTTCTC TGATGGTGTT TACGAGCGTG TCTTCTCAAC CTCTATGGTT
AGTGAAGATG GTACTACTAT TGATGTAGCT GTTTCACCCG CAGGTGATGC TTTATTCGTA
GCGACCATTA ATGGTACTAT GGTTTGGCGC TCACTGGTTG ATCAGACTAC TGGTAAATTG
GGTCAAATAT TTACCGCTCA GGTAAGCAGC ATAACCACAG TTGATAGTGC TGCTCTTATC
AATTCATGGT TTGTTTCCAA TGCCAACACT ATCCTGATTG GCGGCAATAA TGTTGTCTAT
CAGACCAGCA CCAATGGCGT TCTCTGGTTT ATCCGCACCT GTTCTGTTGG CATTGTTACA
TCCTTTGCCG TTTCAACTGA CGGTTCTACT CTGGTAGCCG GCGGTTCCAC TGGCGCAATC
TCCAAATCAG TTGATGGTGG CATTACTTGG GGTACCGCTA CTGCTGCTAC AACTATTACT
TCATCCGTAC CTGTTGTAAC TTTCCAGAAT GGTTCTAACA GCGTAGTCTA CCTCACTGGC
GAAAATGGTG GCGCATTCAA GTATGACTTT GCCGCTACCA CTCCTGCCTG GGTACAGATT
GATAACGCTG TTACCACTGG CGAAACCTTT GACAGCGGTG CCTATGCTGA TGTTGATAAC
GGCGTAGGTA TCTTCTCCGG TATTGCTTCC GGCGGAAACG TCCTGTATGT ACTGGATGGT
ACTTGGGACA ACGTAATCCG CATTACCAAT GTCGGCACTT CCTACAAGGC CGGTATAATT
CCTGCTCCCG CTACCGCCGG TTCTGCCACC AAACTGATTG GTGCTGCTGC CCCCGGTGCT
AACGTGCTTT ACGGTATCTT TGATGACGAA CTGTATGTTT ACACCGACAA GATGGCTGTA
CCCGTAGCCA ACGTTCAGGC CACCAAGATT ACTACCACTG GCTTCACCAT CACTTGGGAT
GCTTTGAATG TTGATAATAG CAATATTACA GTAGAGTATT ACATCGTAAT TACCGATGCT
GCTACTGCTG TTAAAGTTTG CTATGGTCTT CCCACTGGTG CTGGTACAAC CACCGCTACT
ACTCTTAAAG TAACCGGTCT TGACGAAGAC ACCGTTTACC AGATAAGCGT CTGGGCTGTT
GATCCGGTCA TGAGCTTCGT GGGTACTGCT TCAGTAGCTA CCCAGCCCGA AAAACTGACC
TACACCTTCA ACCTGATGCC CACCAACGGT GCTTCCAATG TACCCGTTAA ACCCGTATTC
GCCTGGGATT CAGTTGTTAC TGCTGTTAGC TATGACCTCG TACTCAGCAC CGATCCTACC
TTCGCTGATG CTACCAAGGT TTTGGCTACC AAGAACCTGA CCACCAATTA CTGGGCCTAT
GACGGCACTT TGAGCAACTC AACCAGCTAC TACTGGAAGG TTCGCGTCAA TACCGCCAAC
AGCACCAGTG AATGGTTCCC GGCTGTCTTT ACCACCGTTA AGGCTGATGC AGCCCCGGTA
GAGGTCAATA ATCCTCCGGC TATCACTTTG ACCGTACCTC AGGCTGAAAC TCCTGCCTAC
ATCTGGCTGA TTGTGGCTGT CGGTGCTGTA CTGACCGTCG CTGTAATCGT CCTGATTGTT
CGCACTCGCC GCGTAGTCTA A
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| Protein sequence | MVLSMFTVAA PVAAANQDWS KISLPGSGAT GGYVVSTPSV RFDNIGILEW NADKSAVYAT
AEYDGVMCVF KSTDSGRSWK MVFEDGAVYT LAASGRIFDM VASSVNANEV YFTDGHDIFT
TKDGGATWNK MSNLYTYAAS NFVTAIPTGI IVTLDTAVVG ATKYIFAGTA SLGVAPGANG
VYMCQETAFG MSWTDLDVIN QRETAWGGCN VWDVVVDPTD FATKQGVIAV AEDTTVGSEA
TYITAKYFGN QWNMPSTCID TAVEENNTDS ITGIYHAELW LPSDFNSNVA SGKFQGWLAL
QTSAGQGDVY LWYGNTLTTI DLNVRGYSAG VGTATEVTDI DGIGGIADAR LIIGGYNIAT
ASAPLTWYSS DRLTFSANVK APTGAASSWG LSVATVTVLA MGDYNTSGKA LAGTAGWDCG
VSYTADFGKT WNTISMMRQA IVSVDNMAGN LFIVTSDYAE ESVWRFSDGV YERVFSTSMV
SEDGTTIDVA VSPAGDALFV ATINGTMVWR SLVDQTTGKL GQIFTAQVSS ITTVDSAALI
NSWFVSNANT ILIGGNNVVY QTSTNGVLWF IRTCSVGIVT SFAVSTDGST LVAGGSTGAI
SKSVDGGITW GTATAATTIT SSVPVVTFQN GSNSVVYLTG ENGGAFKYDF AATTPAWVQI
DNAVTTGETF DSGAYADVDN GVGIFSGIAS GGNVLYVLDG TWDNVIRITN VGTSYKAGII
PAPATAGSAT KLIGAAAPGA NVLYGIFDDE LYVYTDKMAV PVANVQATKI TTTGFTITWD
ALNVDNSNIT VEYYIVITDA ATAVKVCYGL PTGAGTTTAT TLKVTGLDED TVYQISVWAV
DPVMSFVGTA SVATQPEKLT YTFNLMPTNG ASNVPVKPVF AWDSVVTAVS YDLVLSTDPT
FADATKVLAT KNLTTNYWAY DGTLSNSTSY YWKVRVNTAN STSEWFPAVF TTVKADAAPV
EVNNPPAITL TVPQAETPAY IWLIVAVGAV LTVAVIVLIV RTRRVV
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