Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1168 |
Symbol | mscL |
ID | 8658096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1077832 |
End bp | 1078305 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | large conductance mechanosensitive channel, MscL family |
Protein accession | YP_003330609 |
Protein GI | 270308551 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000144587 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAG AATTTAAAAC ATTCATTATG CGCGGCAATG TAGTGGATTT GGCGGTAGGT ATAGTAATAG GTGCAGCCTT CGGGGCAATT GTCAACTCAC TGGTAAAGGA TGTTTTAATG CCTCCTGTCG GGTTACTATT AGGCAATGTT GATTTCAGCA ATCTGTTTAT AGTTCTTAAA GAAGGTGCCG CCAGCGGACC ATATGAATCA CTGCTGGTTG CCCAAACCGC CGGAGCAGTA ACAATAAACT ACGGGGTATT TATTAACGCG CTTATCAACT TTCTGATACT GGCTGCTGCT ATTTTCTTTT TTATAGTCAG GCCGCTGAAC CAGCTGGCCG CCCGCCAGAA AAGCAAAGAT GCCGCCGCCC CTGCTCAAAC AGATACCAAA GATTGCCCTT ACTGCGCTAC CCGCATACCC TTGAAAGCCA AGAAATGCCC ATACTGCACA TCAGAGCTGA AACAGACAGA ATGA
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Protein sequence | MFKEFKTFIM RGNVVDLAVG IVIGAAFGAI VNSLVKDVLM PPVGLLLGNV DFSNLFIVLK EGAASGPYES LLVAQTAGAV TINYGVFINA LINFLILAAA IFFFIVRPLN QLAARQKSKD AAAPAQTDTK DCPYCATRIP LKAKKCPYCT SELKQTE
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