Gene DhcVS_1144 details

Gene Information

• Locus tag: DhcVS_1144
• ID: 8658073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 1056460
• End bp: 1058544
• Gene Length: 2085 bp
• Protein Length: 694 aa
• Translation table: 11
• GC content: 48%
• Product: HAD-superfamily hydrolase
• Protein accession: YP_003330586
• Protein GI: 270308528

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.191056
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAATTG AAAGCCTGCG CCCCGCCGAA CATCTGGGAA ACGTAACCAT ACACGGCGTA 
AGGCGTTTTT TAGAACTTGA TTCCGGTGCT CCCAGCCTGC CGCACCTGCA GGAGAGCCGC 
GAAGTAGAGA TGGTAGACCA ACAGGCTATT TCAGATGTTG AAAAGAAAAT GGCTATCATC 
CTGCCTATAA AGGACGAAGA TCTGAAGGTT TTTGAAGGTG TACTAAGCGG CGTACCCCAT 
GACTGCCTGA TGATAGTTAT CAGCAACAGC TCCAAACAGG AAGTGGATAA TTTCAAGAAT 
GAAAAAGACA TAGTAAACCG CTTCTGCCGT ATAACCCACC GCCAGGCTAT AGTTGTCCAC 
CAGAAAAACC CCGAACTGGC AAATGCTATT GCAGATGCCG GCTACCCCGA ACTGCTGGGG 
GAAGACGGGC TTATCCGCAG CGGCAAGGCA GAGGGTATGA TACTGGGTAT TATACTGACT 
ATGTTCAGCG GGCGGGAATA CGTGGGTTTT ATAGATACCG ACAACTACAT ACCGGGGGCA 
GTTTGGGAAT ACGCAAAACA TTTCGCCACC GGTTTTAATC TGGCTCAGTC GCCATATTCC 
ATGGTAAGGG TGCTCTGGAA GTACAAGCCC AAGCTGGTAG GAGAACTATA TTTCAAACGC 
TGGGGACGGG TGTCAGAGGT TACCAATAAA CACCTCAATC ACCTGATATC CAGCAAGGGT 
AAATTTGAAA CCGAGATAAT CAAAACCGGC AATGCCGGTG AACATGCCAT GAGCATAGAG 
CTGGCTAAAC GCCTGACTTA CGGCACAGGT TATGCGGTGG AAACCAAAGA GATTATGTCC 
ATACTGGAAC AATTCAGCGG CATATTGCCT ATAGAAGACA GGGAAGTAGC TGAAGAAGGG 
GTGGAAATAC TCCAGACTGA AACCATTAAT CCTCACCTTC ACGAGGACAA GGGCGGCGAC 
CACCTGATAC AGGATATGCT TTTACCCAGT CTGGCGGTCA TATATCACAG CCCTCTGGCT 
GACGAAGCCG GCCGGAAAAT GATTGAAACC CAACTGGCAG GAATTGAGGG AATGGAAAGC 
AACCCTGAGA TACCCCATAT AAAGCTGATT CCTCCCCCCC AGAAAATGGA CCTTCAGAAA 
TTTTCAGCCA CTATTGAAAA ATACCTGCCC CAGATGGTTT TGCCGGACGG AGAGCTCATT 
TCACGGGTAG CCCGCCCTTC CCGCCTGCCT TCATCAGGAC AATTTAAAAA GATTGTATAT 
ACTGACTTGG ACGGCACTCT GCTGAACCCT TTGACTTATT CATATTCAAC CGCACTGGAT 
GCCCTGCGTT TGTTAAAAGA CAAAGAACTG CCTCTAGTAT TCTGTTCTGC TAAGACCATG 
GGGGAACAAG ACCTGTACCG CAACGAACTG GGTATAAAAG ACCCCTTTAT AACTGAAAAC 
GGGGGAGCTA TATTTATCCC CAAAGATTAC TTCCGCCTGC CCTTTGCTTA TGACAGAGTA 
GCCGGGAATT ATCTGGTGAT TGAACTGGGA ATGAACTACA AAGATATCCG CCATATTCTT 
AAAAAAGCCT TGGCGGAAGC CTGCACCGAG ATAGAAAACT CTGAAAAAGC CGGCAATATA 
TTTATTACCA GCTTCGGGGA TATGTCTGTG GAGGATGTCA GCCGCCTTAC TGACCTTAAC 
CTGAAACAGG CTGAACTGGC CAAACAGCGT GAATACAGTG AAACCGTACA CATAGAGGGT 
GATAAGAGAA GCACCAATAT TGTTTTGAAC CATATACAGC AAAGCGGGCT GGAATATAGT 
TTCGGGGGAC GTTTTTACGA AGTCACCGGC GGCAATGACA AAGGCAAAGC CATAAAGATA 
CTAAACGAAC TTTTCCGCCT GAATTTCGGC AATATCCACA CCTTTGGTCT GGGTGACAGC 
GAAAATGACT ATTCCATGCT GGAAACGGTG GACTCTCCCA TACTGGTGCA ACGCCCCGGC 
AACAAATGGC ACAAGATGCG ATTGCGTAAT CCCAGTTATG TCAGAGGGGT GGGGCCGGAG 
GGTTTCAGCC GGGCAGTTAC TGACATAATA CTGCCCATGG AATAA 

 

Protein sequence

MRIESLRPAE HLGNVTIHGV RRFLELDSGA PSLPHLQESR EVEMVDQQAI SDVEKKMAII 
LPIKDEDLKV FEGVLSGVPH DCLMIVISNS SKQEVDNFKN EKDIVNRFCR ITHRQAIVVH 
QKNPELANAI ADAGYPELLG EDGLIRSGKA EGMILGIILT MFSGREYVGF IDTDNYIPGA 
VWEYAKHFAT GFNLAQSPYS MVRVLWKYKP KLVGELYFKR WGRVSEVTNK HLNHLISSKG 
KFETEIIKTG NAGEHAMSIE LAKRLTYGTG YAVETKEIMS ILEQFSGILP IEDREVAEEG 
VEILQTETIN PHLHEDKGGD HLIQDMLLPS LAVIYHSPLA DEAGRKMIET QLAGIEGMES 
NPEIPHIKLI PPPQKMDLQK FSATIEKYLP QMVLPDGELI SRVARPSRLP SSGQFKKIVY 
TDLDGTLLNP LTYSYSTALD ALRLLKDKEL PLVFCSAKTM GEQDLYRNEL GIKDPFITEN 
GGAIFIPKDY FRLPFAYDRV AGNYLVIELG MNYKDIRHIL KKALAEACTE IENSEKAGNI 
FITSFGDMSV EDVSRLTDLN LKQAELAKQR EYSETVHIEG DKRSTNIVLN HIQQSGLEYS 
FGGRFYEVTG GNDKGKAIKI LNELFRLNFG NIHTFGLGDS ENDYSMLETV DSPILVQRPG 
NKWHKMRLRN PSYVRGVGPE GFSRAVTDII LPME