| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1133 |
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| Symbol | pulE |
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| ID | 8658062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 1044206 |
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| End bp | 1046542 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | type II secretion system protein |
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| Protein accession | YP_003330575 |
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| Protein GI | 270308517 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACAAA ATAAAGTGAA AGACACAGAA CTCCGCAAAC TGGTTAGTAA AAGGGTGGCT
GATTATTTGT CCAGCCACAA TTACCAGGTG GAAAGTGATG TTAAAATAAC CGGGCAATCC
GGTGTAGAGC ATGTCTTTGA CATAGTGGCC CGCCGGAATG ATGGCTTTAC CACCAGAACT
ATGGCGGTCT GCATAATTCT GGGTTCAAAC CAGGAAGAAG AAAGCGGCGC TATTTTCAAT
TTTGCCAACA AAGCCTTTGA TACAGGCATA AATGAACGTA TCCTTATTGC CATACCCAAA
CTTACCCCCG AAACCCGCAA TCTTGCTGAA AAACAACGGA TTAAGGTTTT TGACGAAGAC
CGGCTGGAAG ACCTGCTGGT TACCAGTTCC AAACGGCCTA ACCGTTTGGA GGGTATAAAC
AATATCTTCT CCCGCGAAGA CCTTATCAAG GCGCTTACCG AGCTGGGCTA TACCATAAGA
GAGAATGCCC GTATCAAAGG GCGTTCCGGT ATCTCAAACG TATTTGACAT AGTGGCCAGC
GATATAAATA CAGACAACTA CACTCTGGGT ATAGATATTA TTAAAAAACA GCCTTCCATG
GAACTTCAGG ATGTGGCTCT CTTTGATGCC AAAGCCTTTG ACTGCGGTAT ATCTGACAAG
ATTATGGCTA CCACAGCCAA AATAACTCCT GATGCCCAGC AGTTTGCCGA TGCCCAAAAA
GTGAAACTTA TAAAATTTAA ACCCATTTCT ACAGCTACCG AGGAGAGTGC CGCTGTAACT
ACAGCTGAAG AGGTACTAAA AACTTCGGCC AAAACAGATT CTAAAAACAG CAAAACCGGG
GTAACTGACC TGCGCCAGTC GCCCCGCCCC GAAGCCCTCA AGCTTATCCC TGAGGTGCTT
GCCCGGCGTT ATACTGCCAT ACCTTTGAAT ATAGTGGGTA ATACCTTAGA AATGGCTATG
GCAGACCCGT CTGACATACT GGCACTTGAG GCCTTTTCTG CTCACTCCAA ACGCCGCATA
AAGCCCATAC CGGCAGATGC CCGCGAGATA CGCGAATCTA TAGATTTTAA CTATAAAGGC
TACGGGGATA TTGAAAAATA CCTCTCCCGC ATGTCTATTC CCAGTGAGGT CACAGATGAC
CGTCTGGCTA TAGATGCGGC TATTGACGCG CCGTTAGCCC AAGCCCTTAA TCTTATCATT
GAAGAAGCGG TAAAAGCCCG CTCATCAGAC GTACATATTG AACCCAATGA AGACCGCCTG
CGGGTGCGTT TCCGTATTGA CGGCACCCTG CAGGACATGA TGTCTCTGCC TATTACCGCC
CACCGGGCTA TTATTTCCAG AATCAAAATT CTGGGTGATA TGAATATTGC AGACCATTTC
CACGCACTTG ACGGCCAGTT TACGGTAAAT GCCGGCGGAC GCGAAATAGA TATCCGGGCG
GCAACCGCCC CAACTGTAAA CGGGGAAATG TCTGTACTGC GATTGCTTGA TAAAAGCCGA
GCCACTATAG AACTTTCGCA GCTAGGCTTT TTGCCTGAGG GGCTGGAAAA ATATAACAAG
ATGCTCAAAG TGCCTTATGG CATGATACTT ATCAGCGGTC CTACCGGTGC AGGTAAAACC
ACTACCCTTT ACGCATCTAT AAACTCGCTG GATATCATGC GGCAGAATAT TATTACCATA
GAAGACCCGG CGGAATACCG TTTTAAAGAT ATTAACCAGA TACAGGTAAA TGTGCAGGCA
GGTATTACCT TTGCCAGCGG CCTTAGGTCT ATACTCCGCC TTGACCCTGA TGTAATACTG
GTAGGTGAAA TACGTGATTC GGAAACAGCC AATATAGCCG TTCAGGCAGC CCTTACCGGC
CACCTTATGC TTTCATCTAT CCATGCCAAT GATACTACCG GTGTTCTCTA CCGCCTGATA
GACCTTGGGG TAGAACCCTT CCTGATTGCT TCAGCTGTGG TAGGGGTAGT AGCCCAACGC
ATGGTCAGGC GTATTTGCCC GTACTGCCAG CACACTATTG AAGCACCGGT GATTGAGCAG
TTGGCTTATG AACGTGAGAT AGGGGAAAAG CGGACTAAAT TTGTATACGG CAGCGGCTGT
AAATCATGTG CCTTTACCGG CTATCTGGGA CGGGTGGGCC TGTTTGAAAT AATGACTATA
AGCGATGAAG TCAGACGACT CATGCTGAGC GGGGCTTCCC CCTCGGAGAT ACATGCCCAA
TCCATAAAAG ACGGCATGAC TACCATGATG AAAGACGGTA TGCTGAAAGT AAAGGATAAT
ATAACAACTC CCTCCGAAGT ACTACGCAGT GCTTATTCTC CGGAGGAGCA GTATTGA
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| Protein sequence | MLQNKVKDTE LRKLVSKRVA DYLSSHNYQV ESDVKITGQS GVEHVFDIVA RRNDGFTTRT
MAVCIILGSN QEEESGAIFN FANKAFDTGI NERILIAIPK LTPETRNLAE KQRIKVFDED
RLEDLLVTSS KRPNRLEGIN NIFSREDLIK ALTELGYTIR ENARIKGRSG ISNVFDIVAS
DINTDNYTLG IDIIKKQPSM ELQDVALFDA KAFDCGISDK IMATTAKITP DAQQFADAQK
VKLIKFKPIS TATEESAAVT TAEEVLKTSA KTDSKNSKTG VTDLRQSPRP EALKLIPEVL
ARRYTAIPLN IVGNTLEMAM ADPSDILALE AFSAHSKRRI KPIPADAREI RESIDFNYKG
YGDIEKYLSR MSIPSEVTDD RLAIDAAIDA PLAQALNLII EEAVKARSSD VHIEPNEDRL
RVRFRIDGTL QDMMSLPITA HRAIISRIKI LGDMNIADHF HALDGQFTVN AGGREIDIRA
ATAPTVNGEM SVLRLLDKSR ATIELSQLGF LPEGLEKYNK MLKVPYGMIL ISGPTGAGKT
TTLYASINSL DIMRQNIITI EDPAEYRFKD INQIQVNVQA GITFASGLRS ILRLDPDVIL
VGEIRDSETA NIAVQAALTG HLMLSSIHAN DTTGVLYRLI DLGVEPFLIA SAVVGVVAQR
MVRRICPYCQ HTIEAPVIEQ LAYEREIGEK RTKFVYGSGC KSCAFTGYLG RVGLFEIMTI
SDEVRRLMLS GASPSEIHAQ SIKDGMTTMM KDGMLKVKDN ITTPSEVLRS AYSPEEQY
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