Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1124 |
Symbol | aspC |
ID | 8658053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1036230 |
End bp | 1037426 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | aspartate aminotransferase |
Protein accession | YP_003330566 |
Protein GI | 270308508 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCAC AGGTGGGAAC GGACAAAGGT TTTATCTCGG ACAGAGCCAA AGAGCTCAAG CCTTCCGGCA TACGCAAATT TTTTGACCTG GCCGCCAAGA TGGGCAGCGG AGCTATCTCT CTGGGTGTGG GTGAACCTGA CTTTACAACC CCGTGGCATA TCCGCGAATC TGCTATTTAC GCTCTGGAAA AGGGCTATAC CATGTACACC TCAAACGCCG GGCTTCTGGA ACTCCGCCAG GAAATATCCA AATACCTGTA TCAAACCTAC AAACTGGATT ACAACCCCGA AACCGAAATC TTAATAACCG TAGGCTCAAG CGAGGCTCTG GACCTGGTTA TGCGGGCCAC CCTGAACCCC GGTGACGAAG TACTTATGAC TGACCCAGCC TATGTGGCTT ATCCTTCCTG TGTCTTTATG TCGTACGGCA ACCCGGTACA GATACCCACT TTTGAAGCTA ATAATTTTGA GATAAGTGCG GCAGATATTG CCCCCAGAAT TACCCCCAAA ACCCGTTCAA TTTTGCTGGG ATATCCTTCA AACCCCACCG GGGCGGTTAT GCCCAAGGCA AAACTTACCG AGATTGCCAA GCTAGCCTGC GAGAAGAACC TGCTGGTGGT ATCTGACGAG ATATATGACA AGATTATCTA TTCCGGTTTT GAACATACCT GCTTTGCCAC TTTGCCGGGT ATGCGCGAAC GGAGTGTGAT TATAAACGGC TTTTCCAAAA CTTATGCCAT GACCGGCTGG CGGATTGGCT ATGCGGCCGG TCCAGCTGAT ATTATCCAGG CTATGACCAA GATACATCAG CATACCATGC TGTGCGCTCC TATTGCCGCC CAGAAAGCCG CCCTGGAAGC CCTGAGGAAC GGGCAGGATG ACGTGCGGCT GATGGTAGAG GAATATGACC GCCGACGCCG GTTTATAGTA AAAAGCTTCA ACGATATGGG GCTGTCCTGC TTTGAGCCCA AAGGCGCTTT TTACACCTTT CCTTCAGTCA AAAAAACCGG ACTGAGTTCA GCCGAATTTG CCGAAAAGCT GCTCCTGGAA GAAAAGGTGG CCGCCGTACC CGGCACTGCT TTTGGTGACA GCGGCGAGGG TTACCTGCGC TGCTGTTACG CTACCTCCAT GAAAGATATA GAAGAGGCTA TGAAGCGTTT CCGCCACTTT TTAAAGCACA ACTGCCCCGG AATGTAA
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Protein sequence | MTSQVGTDKG FISDRAKELK PSGIRKFFDL AAKMGSGAIS LGVGEPDFTT PWHIRESAIY ALEKGYTMYT SNAGLLELRQ EISKYLYQTY KLDYNPETEI LITVGSSEAL DLVMRATLNP GDEVLMTDPA YVAYPSCVFM SYGNPVQIPT FEANNFEISA ADIAPRITPK TRSILLGYPS NPTGAVMPKA KLTEIAKLAC EKNLLVVSDE IYDKIIYSGF EHTCFATLPG MRERSVIING FSKTYAMTGW RIGYAAGPAD IIQAMTKIHQ HTMLCAPIAA QKAALEALRN GQDDVRLMVE EYDRRRRFIV KSFNDMGLSC FEPKGAFYTF PSVKKTGLSS AEFAEKLLLE EKVAAVPGTA FGDSGEGYLR CCYATSMKDI EEAMKRFRHF LKHNCPGM
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