Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1117 |
Symbol | gatA |
ID | 8658046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1031323 |
End bp | 1032783 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and amidase |
Protein accession | YP_003330559 |
Protein GI | 270308501 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATT TAGTCAAGCT GACCATTGCC CAGTCCCATA AACTGCTGAA AGAACGAAAG CTATCTTCAG CAGAGCTTAC CAAAGCCCAT CTGGACAGGA TAGAAAAACT TGAGCCTGAA ATAAAGGCTT TTATGACTGT CTGCCCGGAC AGTGCTTTAT CCCAGGCTCA AGCGGCTGAC GAAGCTATAA AACAGGGACA TATCCGCCCG CTAACCGGTA TCCCCATGGC CCTTAAAGAT GTATTATGCA CCAAAGGTAT CCGCACCACC TGTTCCTCCA AGATGCTGGA AAACTTTGTG CCGCCGTATA ATGCCCACGT GGTGGACAAA CTGGCCGAAG AAGGGGCGGT ACTGCTGGGC AAAACCAACA TGGACGAGTT TGCCATGGGT TCTTCCACCG AAAACTCGGC CTTCTTTACC ACCCGAAACC CTTGGAATAC CGCCAAAGTT CCCGGCGGCT CTTCCGGCGG TTCGGCTGCC TGTGTGGCTG CTTCGGAAGC GGTATTTTCA CTGGGTTCGG ATACCGGCGG TTCTATCCGC CAACCGGCCA GCTTCTGCAG TGTTACCGGA CTGAAACCCA GCTACGGCAT GGTAAGCCGC TACGGGCTGG TAGCCTTTGC CAGTTCGCTT GACCAGATAG GCCCTTTTAC CAAAGATGTT CTGGACTGTG CTCTGGTAAT GAATGCCATT GCCGGCTTTG ATGACCGTGA CTCCACTTCC GTCCCCCAGA CAGTGCCTGA TTTCAGCAGC TGCCTTGACG GGGATATAAA GGGGTTTAAA CTGGGTGTAC CCAAAGAATA TTTCAGCCAG AATATGCGGG CAGATATAGC CGAGAAGATA AATGACGCGC TGAGCGTACT TTCGGGTCTG GGTGCAAGCG TAGACCACGA GGTATCTCTG CCCCATACCC CTTATGCACT GGCGGTTTAT TACATACTGG CACCCTCCGA GGCTTCGGCC AATCTGTCAC GTTATGACGG GGTAAAATAC GGTTATTCTT ACAATCAGAC CGAAAACATG TGGGAAGCTA TGGAAAAGAC CCGCGCCAAA GGATTCGGGC CGGAGGTAAA ACGCCGTATT ATGATAGGCA CTTATGCCCT TTCTGCCGGC TATTATGACG CCTGGTATGT CAAAGCCCAG AAGGTACGCA CACTTATAAG CCAGGAATTT AACAATGCCT TTGAAAAATA TGACGCACTG ATAACCCCTA CTACCCCCAA CCTGCCTTTC AGTATCGGTG AAAAGCTGAG TGACCCCTTT GAGATGTACA TGTGTGATAC CTGTACTATC CCCATAAATA TTGCCGGTTT GCCCGCCATA AGCATACCGG CTGGTTTCGT AGATGGTTTA CCGGTGGGTT TACAAATTAT AGGCAAGCCC TTTGCTGACC AGACTATCAT GCGCATAGCC CATGCCTTCC AGTGCGCCAC CGCCTGGCAC AAGGAAACGC CCAGGTTATA G
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Protein sequence | MTDLVKLTIA QSHKLLKERK LSSAELTKAH LDRIEKLEPE IKAFMTVCPD SALSQAQAAD EAIKQGHIRP LTGIPMALKD VLCTKGIRTT CSSKMLENFV PPYNAHVVDK LAEEGAVLLG KTNMDEFAMG SSTENSAFFT TRNPWNTAKV PGGSSGGSAA CVAASEAVFS LGSDTGGSIR QPASFCSVTG LKPSYGMVSR YGLVAFASSL DQIGPFTKDV LDCALVMNAI AGFDDRDSTS VPQTVPDFSS CLDGDIKGFK LGVPKEYFSQ NMRADIAEKI NDALSVLSGL GASVDHEVSL PHTPYALAVY YILAPSEASA NLSRYDGVKY GYSYNQTENM WEAMEKTRAK GFGPEVKRRI MIGTYALSAG YYDAWYVKAQ KVRTLISQEF NNAFEKYDAL ITPTTPNLPF SIGEKLSDPF EMYMCDTCTI PINIAGLPAI SIPAGFVDGL PVGLQIIGKP FADQTIMRIA HAFQCATAWH KETPRL
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