| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1113 |
|---|
| Symbol | hisA |
|---|
| ID | 8658043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 1029483 |
|---|
| End bp | 1030292 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| Protein accession | YP_003330556 |
|---|
| Protein GI | 270308498 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0374916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCTG AACCATTTTG CAGAAACATA TTACTGCAGC AGCGGCGCGG CTCCGTTATC
CCGTATTTAA GCGCTAGTTT CAAGAGAGGT GTCAAAATAG AAATAATACC GGCAATAGAT
ATTTTAGGCG GCAGGTGTGT CCGCCTTCTT CAGGGTGATT ATGCTCAGGA GACGGTATAC
TCTCCGGACC CGGTGGGTAC AGCCATGCGC TGGCAGTCTC TGGGCGCTCC CCGTTTGCAC
GTGGTGGATT TGGACGGTGC TGCTGACGGG GAAAGTGTTA ACTTTGAGCT TATAAGGGAA
ATAGCCAATT CCGCCCTTAT ACCGGTGGAA GTGGGCGGCG GTATCCGCAG TATGGATACG
GTCAAGAAAC TGCTTACGGC CGGGGTTGAC CGGGTAATAC TGGGTACGGC GGCTGTAGAA
AACCCGGAGC TGGTCAGGGA AATATGTGCC AGATACGCTG ACTCGGTAGC CGTCAGTATA
GACGCACGGA ATGGCAAGGT GGCCACCCGC GGCTGGGTAA ACAGTACCGA AGTGGATGCT
TTGGAGCTGG CCCGCAGTAT GAAAAAACTG GGTGTGAAGC GTTTTATTTA CACTGATATC
AGCCGTGACG GCACTCTGAG TGAGCCTAAC TTTGCGGCTA TACGAGACCT TATTTCGGCA
ATCAATATGC CGGTTATAGC TTCAGGGGGT GTTTCCAACC TGAGCCATTT GCGCCTTTTG
AAAGATATCG GTGCGGAGGG GGCTATTGTG GGCAAGGCCA TTTATACCGG TGACCTGAAC
CTTAAACGGG CCTTTGAAGA GTTGTCCTAG
|
|---|
| Protein sequence | MEAEPFCRNI LLQQRRGSVI PYLSASFKRG VKIEIIPAID ILGGRCVRLL QGDYAQETVY
SPDPVGTAMR WQSLGAPRLH VVDLDGAADG ESVNFELIRE IANSALIPVE VGGGIRSMDT
VKKLLTAGVD RVILGTAAVE NPELVREICA RYADSVAVSI DARNGKVATR GWVNSTEVDA
LELARSMKKL GVKRFIYTDI SRDGTLSEPN FAAIRDLISA INMPVIASGG VSNLSHLRLL
KDIGAEGAIV GKAIYTGDLN LKRAFEELS
|
|---|
| |