Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1076 |
Symbol | |
ID | 8658007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 1000757 |
End bp | 1001944 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | sensor histidine kinase |
Protein accession | YP_003330521 |
Protein GI | 270308463 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.118073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAAAC AAGAAGAACT TTTTCATTTA TTTTTAGATA ATATGCTGGA TGCAGTGGCG GTCTACGAAG TGTCACAGGA AGGAAAACCG CTGAAATTCA TGGAGGCCAA TGAGCAAATG TGCCGCTATA TTGGTTATAC CCATGAAGAA TTTTTGAGAA TGCAGCCTGC TGATATTCGT TTTGAATGTT TTAATATTAC TCCAGCCTTG TGGCAGGAAC TGCTGGAAGT CCGCTATCTT TTGAATGAAT ATGCATATAA GACCAAAGAT AATGTATCCG TACCCATAGA GATACATTAT CATTTCTTCC AGCTGGATGG CAGGAATCTG ATATTTTTAA CAATCAGGGA TATTTCAGAA CGTAAAAAAG CTGAAGAAAA CCAACGGAGA TTGGAAAAAG ACCTTAATCT TTCCAGCCGG CTGGCTTCGG TAGGTGCACT TACGGCTGGA GTGGCTCATG AAATAAACAG CCCCCTGACC AGCATACTGG GTTTTTCAGA GAGATTAGCC CGAAAATGTA CCAGTGAAGA ACAGCACCGT GATATCGAGC GTATTCATAC AGAAGCCTTG AGGGCGGCCA AGGTGGTAGA TAATCTGCGT ACCTTTGCCC GCAGTTATGA GCAGGAAAAG AAATTGTGCG GGCTTAATGA TGTTATACGA AAGTCTGTGG AACTGCGTGA ATACGAGCTG GTTGTTCAGA ATATAGTTGT GGAATTGGAA CTGGCAGAAA ATCTGCCGTC TACCCTGATG GATTTTTACA AGATACAGCA GGTGCTGATT AACATGATTC TTAATGCCGA ACAAGCCATG TATCAGGCTC ACGGACGGGG CAGGCTTCTT ATAAAAACCC AGGATATGGG CAACTATATC CGCATGATAA TAGAAGATAA TGGCCCGGGT ATTGCACCTG AGATTGCTGA GAGGGTATTT GACCCCTTTT TCACCACCAA GGAAGATAGC CGGGGCACGG GGTTGGGGTT GAGTGTATGC TACGGTATTA TTATGGAGCA TGACGGCAAA GTACAACTGG AAAGCAAACT GGGGCAGGGA ACCAGATTTA TCATAGACCT GCCGATAAAA AACAGCAGGT TGCCCAGAAA GAAGTCTACC AAGGTGGTTG TAGTAAAAGT GAACGCTAAG ACCCGTGCAA AATCGCCGAA ATCTTTGCCT CAAAATCCGC CTGACTAA
|
Protein sequence | MMKQEELFHL FLDNMLDAVA VYEVSQEGKP LKFMEANEQM CRYIGYTHEE FLRMQPADIR FECFNITPAL WQELLEVRYL LNEYAYKTKD NVSVPIEIHY HFFQLDGRNL IFLTIRDISE RKKAEENQRR LEKDLNLSSR LASVGALTAG VAHEINSPLT SILGFSERLA RKCTSEEQHR DIERIHTEAL RAAKVVDNLR TFARSYEQEK KLCGLNDVIR KSVELREYEL VVQNIVVELE LAENLPSTLM DFYKIQQVLI NMILNAEQAM YQAHGRGRLL IKTQDMGNYI RMIIEDNGPG IAPEIAERVF DPFFTTKEDS RGTGLGLSVC YGIIMEHDGK VQLESKLGQG TRFIIDLPIK NSRLPRKKST KVVVVKVNAK TRAKSPKSLP QNPPD
|
| |