Gene DhcVS_1072 details

Gene Information

• Locus tag: DhcVS_1072
• Symbol: rph
• ID: 8658003
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 998771
• End bp: 999490
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 49%
• Product: ribonuclease PH
• Protein accession: YP_003330517
• Protein GI: 270308459

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.0967941
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAGAG GTGATGGCCG CAACTTTAAC CAGCTAAGGC CGATAACAAT TACCCCCGGT 
TTCCAGAGCT TTGCCGAGGG TTCGGTTTTG ATAGAGCAGG GTAAGACCCG GGTAATCTGC 
TCGGTCAGTA TGGAAGATAA AGTCCCCCAG TTTCTGCGAA ACAGTGGCAC CGGCTGGGTT 
ACGGCTGAAT ATTCCATGCT GCCGCGTTCT ACTGTTACCC GCACACAGAG GGATTCATCT 
GCCGGTAAGA TATCCGGCCG GAGCCAGGAA ATTCAGCGTC TTATAGGCCG TTCCCTGCGT 
TCCTGTGTGG ATTTAACGGC TCTGGGCGAG AGGTCTTTTA TTATAGACTG TGATGTTATT 
CAGGCAGATG CCGGTACCCG CACCGCTTCC ATAACCGGTG CTTATATTGC CCTGTATCTG 
GCGTTTAAAA AGATGGTAGA TATGGGTATC CTCTCCAAAA TGCCTTTTAC TTCTCAGGTG 
GCGGCGGTCA GCGTCAGTAT TTTTAAAGGC AATATAGTGC TTGACCCCTG TTACGATGAG 
GATTTTCAGG CCGAAGTGGA TTTTAACCTG GTTATGAATG ACCGGGCTGA GTTTGTGGAA 
ATACAGGGTA CGGCTGAGGG CAAGACTTTT TCCCGTGATA CCCTTGACCA GGTACTCAAA 
CTGGGCGAAT CCGGTATCAA ACAGCTTTTT GATATTCAGA ATAGTATTAC CCGGCCGTAG 

 

Protein sequence

MQRGDGRNFN QLRPITITPG FQSFAEGSVL IEQGKTRVIC SVSMEDKVPQ FLRNSGTGWV 
TAEYSMLPRS TVTRTQRDSS AGKISGRSQE IQRLIGRSLR SCVDLTALGE RSFIIDCDVI 
QADAGTRTAS ITGAYIALYL AFKKMVDMGI LSKMPFTSQV AAVSVSIFKG NIVLDPCYDE 
DFQAEVDFNL VMNDRAEFVE IQGTAEGKTF SRDTLDQVLK LGESGIKQLF DIQNSITRP