Gene DhcVS_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_1064 
Symbolmfd 
ID8657995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp988880 
End bp992344 
Gene Length3465 bp 
Protein Length1154 aa 
Translation table11 
GC content48% 
IMG OID 
Producttranscription-repair coupling factor (superfamily II helicase) 
Protein accessionYP_003330509 
Protein GI270308451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.566316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTTTGG AGAAGATATT GAATCTTAGC GGTTTGTTGC CTCTTATAGA CCAAAGCCCG 
TTATTTGACA GCCTGTTTCA AGCTCTGGAT AGGGGTGAAG CTGATATTTC GGTTTTAGAT
GCGGGGCGGG GGTTTAGTCT GGCATCTGTA TACCGCAGGT TAAAATGCCC CATGCTGGTT
ATTACCTCGC AGCCGGAGCG GGCAAGGGAA CTTTTGGAGC AGATAGCTGC TTATACAGGA
GAGGAGCCGG GTTTTCTGCC TGACCCCAGT CTGCTGCCTT ATCAGCGGGC TGTTTCTGAC
CGTAATTCTT CACTGGAAAA GATGCGGCTG GCAGGCATTC TGGGCGGGTA TATCCGCAGC
GGAGATTCAC GGATAATAGT TACGGCTGTG CCGGCTTTGC TGCAGCGGTA CGTTTCTCCG
GAAATATTTA AACAATCTTT TATACAAGTC TGGGCCGGGT TGGAAATAGA ACCCCAGGAC
TTAATCAGCC GTTTTCAGCA GTTGGGATAC CGTCAGGAAA GCATAGTGGA GATACCGGGT
ACATATTCCC ATCGGGGCGG CATACTGGAT ATTTTCCCTC ATACCGAAGA TAATCCGGTA
AGGCTGGAAT TTTTCGGTAA TACTCTGGAA AGTCTGCGTA ATTTTGATCC CAAGAGCCAG
CGTTCGGGAA AAGCGGTAAA TGAGCTTACT ATAAGCCCCG CAAGTGAGCT TTTTCATCTG
GGGCAGCTGA CCCGTAAGGA CATTAATAAC CGGCTGGATA TTTTGCTCAC AGATAATCTA
AATCCCGAAT TCAGCCGTAC TCTGTCAGCA GATATAAACC ATCTTAACGA GGGCCTGAAA
CCCGAATACC CCGAATTTTT CGCTCCTCTT TTTAATACCT CAAGCATACT TGATTACCTT
CCGTCAGATG CTCTGGTAGT GCTGGATGAA CCTGCCTCCA TAGAGCAGGC AGCTTTTCAT
CTGGATAAAG AAGCCGAAGA ACTGCGCTCT GACCGTCTGT CACATGGTGA ACTTCCTTCC
GTTTATCCCC GTCCGTATTT TAACTGGGCA GAGATATCCG CCATGCTGAA AACCAAAAAA
CGGCTTATTA TGGCCTCCTT CGGGCGGGAG AGTGAGTCTT TAAAGCTGGA TTTTGCTTCC
CCGGATAATT ATGTAGGGCG TTTATCCGGT TTGTATGAAA AATTGCCGGA ACTAAAAGGA
CACACTGGCA GAGTGGTTAT TGTCAGTCAT CAGGCCGCCC GTCTAGCTGA GCTTTTAAAA
GAGCGCAGTA TTTTGGCGGT TGTCCAGACA GATGTATTAA CCCCCCCTCC GCCTGCCAGT
CTCAGTCTGG TTCAAGGGAT ACTGGGTTCC GGCTGGAGTT TAAGTGATAA CTTGCATATT
CTCACTGATG CCGAACTTTT CGGCTTTGTA AAACAGCGGC GTCTACCTTC CAAGCGTCCG
TCTGCCCGTA AGGGTGTGGT GCTGGATATA AAACCGGGTG AATTTGTGGT GCATATAGAC
CATGGTGTGG CTTTGTTCAG CGGGGTCAGC CATATGAACC GTGATGGTAT GGATAAAGAG
TACCTGATAC TCCAGTATGC CGGCGGTGAC AAACTTTATG TGCCGACAGA CCAAATGGAC
AGAGTAAACC GTTTTATAGG CAGCGGAGAT GAACCGCCGT CTTTGCACCG CTTGGGTACT
CAGGAATGGC AAAGGGCAAA AGAAAAGGCC AGTGAATCCG CGGAGGAAAC TGCCCGCGAA
CTCCTTGATA TCTATGCTAA ACGCGAGTTG GCAAATGGCT ATGCATTTTC GGCAGATACT
GTCTGGCAGC AAGAAATGGA GGCATCCTTT CCGTATGTGG AAACTCCTGA CCAGCTGAAA
GCTCTGTGCG ATATCAAAGA AGATATGGAA AAAACCCGCC CTATGGACAG GCTTATACTG
GGGGATGTTG GCTACGGTAA AACCGAAGTA GCTATACGGG CAGCTTTCAA GGCGGTCATG
GACGGCAAGC AGGTGGCAGT GTTGGTACCT ACTACAGTGC TTGCCCAGCA GCATTACACT
ACTTTCCGTG AGCGGCTGGC TACTTTTCCG GTCAAAGTAG AGGTGCTTAG CCGTTTTCGC
AGCCAGTCCG AACAGAAAGA AGTGGTTGAA AATATGGAAA AAGGCGAAGT GGATATCTGC
ATAGGTACTC ACCGCCTGCT TCAGGCAGAT ATAAAGTTTA AAGATTTGGG ACTGGTAATT
ATAGACGAAG AGCAACGCTT CGGGGTAGCG CACAAGGAAT TTTTCAAGAA ACTGCGTGCC
CAGGTAGATG TGCTTACCCT TAGTGCAACA CCCATTCCCC GTACTTTGCA TATGTCTATG
GTTGGGGTAA GGGATATGAG TGTTATAGAA ACTCCGCCCG GTGAACGCCT GCCTATTAAA
ACCGTAGTAG CTGCTTTTGA TGAACGGCTG ATACGTGAAG CTATACTGCG GGAGATGGAA
AGGAACGGGC AGGTATTTTT CGTGAGTAAC CGGGTAATGG GCATAAATTT ACTTGCAGAG
CGTATTCAGA AGCTTGTCCC CGAAGCCCGT ATAGGTATCG GGCACGGGCA GATGGCTGAA
GATAAGCTAG CCGCCGTAAT GGCTGATTTT GTGCGGTATG AACTGGACGT GCTGGTATGT
ACTACTATTA TAGAATCCGG AGTGGATGTG CCGAATGCCA ATACCCTGAT TATAAACAGG
GCAGACCGCT TTGGGCTTAC CCAGCTTTAC CAGCTGCGGG GGCGGGTGGG GCGGAGCTCC
CAGCTGGCAT ATGCCTATTT CCTGTATGAC AAAGAAAAAC ACTTAAGCGG TGATGCTGAA
AAACGCCTGA AAACTATTTA TGAAGCAGCT GAACTTGGGG CAGGATATGG TATTGCCATG
AAAGATTTGG AAATAAGGGG TGCAGGAACA CTGCTTGGCG TAAAACAATC AGGTTATATA
AATTCGGTCG GTTTCAACCT ATACACCCAG ATGCTGTCAG AAGCAGTAGC CGGACTGAAA
GCTGCCGGAA GCGGGCTTTC CAAAGAAGAA ATACGCATCC AGAATATGCC TGCCCCCAAG
CTGGATTTAC CCTTAGACGC ATTTATACCC GAATACTATA TCCAGGATCT GGATTTACGT
TTGTCTATTT ACCAGCAGTT ATCAACTCTG GCCAGTCTGG CAGGCGTTCT GGAAAAGGAA
AAAGAACTGA CAGACCGGTT CGGGGTAATG CCAAAGGAAC TTGAAAATCT GCTATATTCA
TTCCGTTTAC GTTTGCTGGC TAAAAAAGCC CACGTGGAAA CTATCGTAAC CGAAGGCAGC
CAGATAGTAG TGCGGATGCT GGGCGGGCTG ATAATAAATA AAGCTTTGCT TGAACCGCTT
AAAGCGGGAG TGGTGGCAGG GCGTAATCAG GTGGCTATCC AGTTCAGAAA GACTGGCGAT
AGTTGGAAAG AAGTGTTAGA AGAGATTATC TGGCGGCTGG GGTAG
 
Protein sequence
MCLEKILNLS GLLPLIDQSP LFDSLFQALD RGEADISVLD AGRGFSLASV YRRLKCPMLV 
ITSQPERARE LLEQIAAYTG EEPGFLPDPS LLPYQRAVSD RNSSLEKMRL AGILGGYIRS
GDSRIIVTAV PALLQRYVSP EIFKQSFIQV WAGLEIEPQD LISRFQQLGY RQESIVEIPG
TYSHRGGILD IFPHTEDNPV RLEFFGNTLE SLRNFDPKSQ RSGKAVNELT ISPASELFHL
GQLTRKDINN RLDILLTDNL NPEFSRTLSA DINHLNEGLK PEYPEFFAPL FNTSSILDYL
PSDALVVLDE PASIEQAAFH LDKEAEELRS DRLSHGELPS VYPRPYFNWA EISAMLKTKK
RLIMASFGRE SESLKLDFAS PDNYVGRLSG LYEKLPELKG HTGRVVIVSH QAARLAELLK
ERSILAVVQT DVLTPPPPAS LSLVQGILGS GWSLSDNLHI LTDAELFGFV KQRRLPSKRP
SARKGVVLDI KPGEFVVHID HGVALFSGVS HMNRDGMDKE YLILQYAGGD KLYVPTDQMD
RVNRFIGSGD EPPSLHRLGT QEWQRAKEKA SESAEETARE LLDIYAKREL ANGYAFSADT
VWQQEMEASF PYVETPDQLK ALCDIKEDME KTRPMDRLIL GDVGYGKTEV AIRAAFKAVM
DGKQVAVLVP TTVLAQQHYT TFRERLATFP VKVEVLSRFR SQSEQKEVVE NMEKGEVDIC
IGTHRLLQAD IKFKDLGLVI IDEEQRFGVA HKEFFKKLRA QVDVLTLSAT PIPRTLHMSM
VGVRDMSVIE TPPGERLPIK TVVAAFDERL IREAILREME RNGQVFFVSN RVMGINLLAE
RIQKLVPEAR IGIGHGQMAE DKLAAVMADF VRYELDVLVC TTIIESGVDV PNANTLIINR
ADRFGLTQLY QLRGRVGRSS QLAYAYFLYD KEKHLSGDAE KRLKTIYEAA ELGAGYGIAM
KDLEIRGAGT LLGVKQSGYI NSVGFNLYTQ MLSEAVAGLK AAGSGLSKEE IRIQNMPAPK
LDLPLDAFIP EYYIQDLDLR LSIYQQLSTL ASLAGVLEKE KELTDRFGVM PKELENLLYS
FRLRLLAKKA HVETIVTEGS QIVVRMLGGL IINKALLEPL KAGVVAGRNQ VAIQFRKTGD
SWKEVLEEII WRLG