| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_106 |
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| Symbol | rdhD |
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| ID | 8657060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 102422 |
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| End bp | 103099 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_003329607 |
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| Protein GI | 270307549 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTTTGG AGAAGATATT GAATCTTAGC GGTTTGTTGC CTCTTATAGA CCAAAGCCCG
TTATTTGACA GCCTGTTTCA AGCTCTGGAT AGGGGTGAAG CTGATATTTC GGTTTTAGAT
GCGGGGCGGG GGTTTAGTCT GGCATCTGTA TACCGCAGGT TAAAATGCCC CATGCTGGTT
ATTACCTCGC AGCCGGAGCG GGCAAGGGAA CTTTTGGAGC AGATAGCTGC TTATACAGGA
GAGGAGCCGG GTTTTCTGCC TGACCCCAGT CTGCTGCCTT ATCAGCGGGC TGTTTCTGAC
CGTAATTCTT CACTGGAAAA GATGCGGCTG GCAGGCATTC TGGGCGGGTA TATCCGCAGC
GGAGATTCAC GGATAATAGT TACGGCTGTG CCGGCTTTGC TGCAGCGGTA CGTTTCTCCG
GAAATATTTA AACAATCTTT TATACAAGTC TGGGCCGGGT TGGAAATAGA ACCCCAGGAC
TTAATCAGCC GTTTTCAGCA GTTGGGATAC CGTCAGGAAA GCATAGTGGA GATACCGGGT
ACATATTCCC ATCGGGGCGG CATACTGGAT ATTTTCCCTC ATACCGAAGA TAATCCGGTA
AGGCTGGAAT TTTTCGGTAA TACTCTGGAA AGTCTGCGTA ATTTTGATCC CAAGAGCCAG
CGTTCGGGAA AAGCGGTAAA TGAGCTTACT ATAAGCCCCG CAAGTGAGCT TTTTCATCTG
GGGCAGCTGA CCCGTAAGGA CATTAATAAC CGGCTGGATA TTTTGCTCAC AGATAATCTA
AATCCCGAAT TCAGCCGTAC TCTGTCAGCA GATATAAACC ATCTTAACGA GGGCCTGAAA
CCCGAATACC CCGAATTTTT CGCTCCTCTT TTTAATACCT CAAGCATACT TGATTACCTT
CCGTCAGATG CTCTGGTAGT GCTGGATGAA CCTGCCTCCA TAGAGCAGGC AGCTTTTCAT
CTGGATAAAG AAGCCGAAGA ACTGCGCTCT GACCGTCTGT CACATGGTGA ACTTCCTTCC
GTTTATCCCC GTCCGTATTT TAACTGGGCA GAGATATCCG CCATGCTGAA AACCAAAAAA
CGGCTTATTA TGGCCTCCTT CGGGCGGGAG AGTGAGTCTT TAAAGCTGGA TTTTGCTTCC
CCGGATAATT ATGTAGGGCG TTTATCCGGT TTGTATGAAA AATTGCCGGA ACTAAAAGGA
CACACTGGCA GAGTGGTTAT TGTCAGTCAT CAGGCCGCCC GTCTAGCTGA GCTTTTAAAA
GAGCGCAGTA TTTTGGCGGT TGTCCAGACA GATGTATTAA CCCCCCCTCC GCCTGCCAGT
CTCAGTCTGG TTCAAGGGAT ACTGGGTTCC GGCTGGAGTT TAAGTGATAA CTTGCATATT
CTCACTGATG CCGAACTTTT CGGCTTTGTA AAACAGCGGC GTCTACCTTC CAAGCGTCCG
TCTGCCCGTA AGGGTGTGGT GCTGGATATA AAACCGGGTG AATTTGTGGT GCATATAGAC
CATGGTGTGG CTTTGTTCAG CGGGGTCAGC CATATGAACC GTGATGGTAT GGATAAAGAG
TACCTGATAC TCCAGTATGC CGGCGGTGAC AAACTTTATG TGCCGACAGA CCAAATGGAC
AGAGTAAACC GTTTTATAGG CAGCGGAGAT GAACCGCCGT CTTTGCACCG CTTGGGTACT
CAGGAATGGC AAAGGGCAAA AGAAAAGGCC AGTGAATCCG CGGAGGAAAC TGCCCGCGAA
CTCCTTGATA TCTATGCTAA ACGCGAGTTG GCAAATGGCT ATGCATTTTC GGCAGATACT
GTCTGGCAGC AAGAAATGGA GGCATCCTTT CCGTATGTGG AAACTCCTGA CCAGCTGAAA
GCTCTGTGCG ATATCAAAGA AGATATGGAA AAAACCCGCC CTATGGACAG GCTTATACTG
GGGGATGTTG GCTACGGTAA AACCGAAGTA GCTATACGGG CAGCTTTCAA GGCGGTCATG
GACGGCAAGC AGGTGGCAGT GTTGGTACCT ACTACAGTGC TTGCCCAGCA GCATTACACT
ACTTTCCGTG AGCGGCTGGC TACTTTTCCG GTCAAAGTAG AGGTGCTTAG CCGTTTTCGC
AGCCAGTCCG AACAGAAAGA AGTGGTTGAA AATATGGAAA AAGGCGAAGT GGATATCTGC
ATAGGTACTC ACCGCCTGCT TCAGGCAGAT ATAAAGTTTA AAGATTTGGG ACTGGTAATT
ATAGACGAAG AGCAACGCTT CGGGGTAGCG CACAAGGAAT TTTTCAAGAA ACTGCGTGCC
CAGGTAGATG TGCTTACCCT TAGTGCAACA CCCATTCCCC GTACTTTGCA TATGTCTATG
GTTGGGGTAA GGGATATGAG TGTTATAGAA ACTCCGCCCG GTGAACGCCT GCCTATTAAA
ACCGTAGTAG CTGCTTTTGA TGAACGGCTG ATACGTGAAG CTATACTGCG GGAGATGGAA
AGGAACGGGC AGGTATTTTT CGTGAGTAAC CGGGTAATGG GCATAAATTT ACTTGCAGAG
CGTATTCAGA AGCTTGTCCC CGAAGCCCGT ATAGGTATCG GGCACGGGCA GATGGCTGAA
GATAAGCTAG CCGCCGTAAT GGCTGATTTT GTGCGGTATG AACTGGACGT GCTGGTATGT
ACTACTATTA TAGAATCCGG AGTGGATGTG CCGAATGCCA ATACCCTGAT TATAAACAGG
GCAGACCGCT TTGGGCTTAC CCAGCTTTAC CAGCTGCGGG GGCGGGTGGG GCGGAGCTCC
CAGCTGGCAT ATGCCTATTT CCTGTATGAC AAAGAAAAAC ACTTAAGCGG TGATGCTGAA
AAACGCCTGA AAACTATTTA TGAAGCAGCT GAACTTGGGG CAGGATATGG TATTGCCATG
AAAGATTTGG AAATAAGGGG TGCAGGAACA CTGCTTGGCG TAAAACAATC AGGTTATATA
AATTCGGTCG GTTTCAACCT ATACACCCAG ATGCTGTCAG AAGCAGTAGC CGGACTGAAA
GCTGCCGGAA GCGGGCTTTC CAAAGAAGAA ATACGCATCC AGAATATGCC TGCCCCCAAG
CTGGATTTAC CCTTAGACGC ATTTATACCC GAATACTATA TCCAGGATCT GGATTTACGT
TTGTCTATTT ACCAGCAGTT ATCAACTCTG GCCAGTCTGG CAGGCGTTCT GGAAAAGGAA
AAAGAACTGA CAGACCGGTT CGGGGTAATG CCAAAGGAAC TTGAAAATCT GCTATATTCA
TTCCGTTTAC GTTTGCTGGC TAAAAAAGCC CACGTGGAAA CTATCGTAAC CGAAGGCAGC
CAGATAGTAG TGCGGATGCT GGGCGGGCTG ATAATAAATA AAGCTTTGCT TGAACCGCTT
AAAGCGGGAG TGGTGGCAGG GCGTAATCAG GTGGCTATCC AGTTCAGAAA GACTGGCGAT
AGTTGGAAAG AAGTGTTAGA AGAGATTATC TGGCGGCTGG GGTAG
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| Protein sequence | MNVVIIEDDD VIIESLTLLF RMRWPETKLV SSKLGDKGLE LIVDWNPNLV ILDLGLPDLD
GLEVLKRIRL FSNVPVIILT VRGDEAEIVK GLEYGADDYI TKPFKQLEFL ARVKALTRRQ
EVPAIATCYQ KGPFRLVSAT HRLYLKDKEI ALTHTEYLIF YKLLENANVV ISHNTLSKML
WGEDYPDSVD AIRVYISRIR QKIHDDSSEP SIILTKTGLG YMLSA
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