Gene DhcVS_1052 details

Gene Information

• Locus tag: DhcVS_1052
• ID: 8657983
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 979854
• End bp: 980417
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 38%
• Product: HNH endonuclease domain protein
• Protein accession: YP_003330497
• Protein GI: 270308439

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGATG AGATTAAACC GGGACAGGTA ATATCCTACC TTGATATGTG CCAAGCAGAG 
TCTGTCAATT TACAAAAAGG GATGAATTTC AAACTACGCA ATGGTCACAA CATTATACTT 
ATGAGTGTGC GTAATGGAGC ACCTTACGCT GACAGATTTG AGAACGATGG AACTATACTT 
ATATACGAAG GACATGATGT AAACAAAACA CCAGAACTCG TTAACCCTAA AAACATTGAT 
CAACCAATGT ACACCCCAGG ACATAAACTT ACTGCTAACG GCCTTTTCTA TGAAGCCGCT 
CAAAAAGCCA AGCAAACGAA GATATTTCCT AAAGTTCGTG TTTATGAAAA GATAAAACCC 
GAAATATGGG TTTATAATGG TGTTTTCAAC CTAATTGATG CTTGGCAAGA GCCCTCTGAT 
AATCGTAAAG TCTTTAAGTT CAAACTAGAG CTAACTTCAG AGATTACTAA TGAAATAGCA 
ACGCCTACTT TAGATGCTGA TATAAGGGCT ATACCTTCAG ATATAAATGA ATTGTTTGGG 
CTAGAGACCA AGGTAAATGC GTAA 

 

Protein sequence

MTDEIKPGQV ISYLDMCQAE SVNLQKGMNF KLRNGHNIIL MSVRNGAPYA DRFENDGTIL 
IYEGHDVNKT PELVNPKNID QPMYTPGHKL TANGLFYEAA QKAKQTKIFP KVRVYEKIKP 
EIWVYNGVFN LIDAWQEPSD NRKVFKFKLE LTSEITNEIA TPTLDADIRA IPSDINELFG 
LETKVNA