| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1048 |
|---|
| Symbol | |
|---|
| ID | 8657979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 974587 |
|---|
| End bp | 975429 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | DegV |
|---|
| Protein accession | YP_003330493 |
|---|
| Protein GI | 270308435 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.925497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTAA AAATAATCAC CGACAGCACC TCTGACATTC CGCCCGAAAT GGCTAACAAT
ATGGGGATTA CGATAATCCC CCTGACTGTC TCTTTTGGCA GCGAACACTT CCTGGATAAT
GTAACTTTGA AACCTGACGA ATTTTACCGC CGCCTTTCCT TAAGCGGCAT TTACCCCCAT
ACCACCCAGC CCTCACCGCT TGTCTTTAAA GAAACCTATG AAAAACTTAT GCCGCAGGCC
GAAGGCATAC TTGTTATTAC CATATCATCC AAGCTGTCCG GCACCTACCA GTCCGCCCTG
AGTGCCGTAA GTATGCTGGA AAACCCCGGC TGCCCTATAG AAATAATAGA CTCTCAAACA
GTCAGTCTGG CACTGGGTCT GCTGGCTATA AAAGCAAATG ATTTGGCAAA ATGCGGGAAA
AATCTTGCAG AGATAAAAGA GACCATTACC CAAAGCCTGC CTGATGCCCA GCCGGTTATG
TTTTTTGATA CCCTGACCTA CCTGCAAAAA GGCGGGAGAA TAGGCCGTGC CCAAAGCATG
CTGGGTTCAC TTCTTTCGGT AAAGCCGCTG CTTACGGTAC GTGACGGTAT AGTAACTCCC
TTAACCAGAG TACGCTCACT GCAAGCCGGC ATGGACCAGC TTTACAACTT TGCCGCCCAG
CACAGCACTC TTGAGTATGT GGGTATTGGT TATGCCACAT CTACCGCTGA TGCCCTAAAA
CTAAAGGAAC GCCTTGCTCC CCTGTTCCCG CCTGAAAAAA TATACATAAC CCAGGTAGGG
CCGGTAGTGG GCACATATAC AGGGCCGAAT ACCCTGTGTA TAAACGTAAT CGGAAAAAGT
TGA
|
|---|
| Protein sequence | MAVKIITDST SDIPPEMANN MGITIIPLTV SFGSEHFLDN VTLKPDEFYR RLSLSGIYPH
TTQPSPLVFK ETYEKLMPQA EGILVITISS KLSGTYQSAL SAVSMLENPG CPIEIIDSQT
VSLALGLLAI KANDLAKCGK NLAEIKETIT QSLPDAQPVM FFDTLTYLQK GGRIGRAQSM
LGSLLSVKPL LTVRDGIVTP LTRVRSLQAG MDQLYNFAAQ HSTLEYVGIG YATSTADALK
LKERLAPLFP PEKIYITQVG PVVGTYTGPN TLCINVIGKS
|
|---|
| |