| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1047 |
|---|
| Symbol | |
|---|
| ID | 8657978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 973731 |
|---|
| End bp | 974570 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | DegV |
|---|
| Protein accession | YP_003330492 |
|---|
| Protein GI | 270308434 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.119875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTCA AAATAGTAAC CGACAGCACT TCGGATATCA GCCAGAAGCT GGCCGTTGAA
CTGGGCATAA CCGTAGTTCC GCTGACAGTT TCGTTTGACA ATGAACACTT TAAAGACGGC
CTAAGCATAA CACCTGACCA GTTTTTCAGC CGCCTTACTT CTCAAAATAT ATTCCCCACT
ACCACCCAGC CTTCACCGGG AATATTTCTG GAAACATTTG AAAAACTATG CGAAGAAACA
GACGAGATAC TGGTTATCAC CCTTTCCTCA AAACTTTCCG GTACTTATTC ATCTGCTAAA
AATGCCGCCG AGATGATACA CGGCCGCTGC CAGGTGGAAG TAATAGATTC CGAAAAGGTC
ATAATGGGAA CCGGGCTGCT GACTATTTAT GCCGCCGAAC TGGCCAAAAC CGGTCTCAAT
CTTAAGGAAC TCAGCCAGAC TATCCGCCAA AAAATGGCAG ACTGCCACCC CATCATGTAC
TTTGACACCC TGACTTACCT CCACAAGGGA GGGCGAATGG GTAAAGCTCA AAGTCTAGTG
GGTTCGCTGC TTTCTATAAA ACCCATTTTG AAAATGGAAG ACGGCATTAT CTGCCCCCTT
TCCAAAGTGC GTTCCCGCAG AGCCGGCATC GATTACCTGT ATAAATTTAT CACCGCTTTC
CCTAAGATAA AATACCTGGC GGTAGAACAC GCCACTAGCC CGGAAGATGC GGATGAACTG
GTATCTAAAC TGGGAGAAAT ACTGCCCAAA GTGAAAATAT ACCGGTCGCA AATTGGACCG
GTGGTAGGCG CCTATACCGG AGCGAATGCG GTAGCCGTTA CCGTTCTGGA AGACAAATAA
|
|---|
| Protein sequence | MTVKIVTDST SDISQKLAVE LGITVVPLTV SFDNEHFKDG LSITPDQFFS RLTSQNIFPT
TTQPSPGIFL ETFEKLCEET DEILVITLSS KLSGTYSSAK NAAEMIHGRC QVEVIDSEKV
IMGTGLLTIY AAELAKTGLN LKELSQTIRQ KMADCHPIMY FDTLTYLHKG GRMGKAQSLV
GSLLSIKPIL KMEDGIICPL SKVRSRRAGI DYLYKFITAF PKIKYLAVEH ATSPEDADEL
VSKLGEILPK VKIYRSQIGP VVGAYTGANA VAVTVLEDK
|
|---|
| |