Gene DhcVS_1024 details

Gene Information

• Locus tag: DhcVS_1024
• ID: 8657955
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 954971
• End bp: 955789
• Gene Length: 819 bp
• Protein Length: 272 aa
• Translation table: 11
• GC content: 47%
• Product: lipoprotein
• Protein accession: YP_003330469
• Protein GI: 270308411

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00757577
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAAAT GCCTCAGACG CATTGCCTTT ATGAGCCTTG TTTCCCTGCT TTTGGTACTT 
TCCGCCTGTG GCGGAGGAAA TGACCCTGAC AGCAACCCAT CTAATCCCCC CCCAGATGAC 
AACTCCAATA ATTCTTCCAA TCCGCCGCTT GTATATGACC CCTATTCCCA GTATGAGGGG 
TACCTGCTGC AAGGATACCC TGAGCAGATG TGGCCGCTTT ATGAGAGCAA GGCCATAAGC 
TCCTGCAATT TAGATGTGTT TTTCCCCGGC TTTAATATGA ACCCGGGATA TGTATGTACT 
TACAACGTTG TTTACTACAG CGAAAAACCC AAAGCTGAGA TTGTAGCTTA TTATGCCGGG 
CTTGCCGGAA GCCTGAACCC CTCCAGCTTT TATGACGTGG ACACTGATAT AAATGATTAT 
CACTTTACCG CCAGAGTTGT AGAAGAAGGC AGCCGTAATC TGATTTACCT GGCAGCTGAT 
ATGCCTGATA ATTTTTATAC CAAACATCCC CTTTGGGGGG ATTTCCTGTC AGATGTATTC 
CCCGTTTTTA ACCTTACCCA GCAGCGATAC CATGACGTAG CCTGCCGGAG CAACGGAGAC 
GGTGAACTTC AGTACACCAA TCACTATAAT TTCAGCGGCG GCAGACAGGC CGCAGTGGAA 
TACTACCGCG CCCGGCTGCA GAATATGGCT GAATATACCG AAACTATAAA TTCGGATAGT 
ACCTGCACCA CTCTTTCCGG TGTAGTACGC GGCTTTGACT TTCAGGTATT GATTTACAAT 
GACAACATTG CAATTTTCCT GGAAAAACCG TTTGACTAG 

 

Protein sequence

MKKCLRRIAF MSLVSLLLVL SACGGGNDPD SNPSNPPPDD NSNNSSNPPL VYDPYSQYEG 
YLLQGYPEQM WPLYESKAIS SCNLDVFFPG FNMNPGYVCT YNVVYYSEKP KAEIVAYYAG 
LAGSLNPSSF YDVDTDINDY HFTARVVEEG SRNLIYLAAD MPDNFYTKHP LWGDFLSDVF 
PVFNLTQQRY HDVACRSNGD GELQYTNHYN FSGGRQAAVE YYRARLQNMA EYTETINSDS 
TCTTLSGVVR GFDFQVLIYN DNIAIFLEKP FD