Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_101 |
Symbol | rdhI |
ID | 8657055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 94970 |
End bp | 96454 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | radical SAM/B12 binding domain protein |
Protein accession | YP_003329602 |
Protein GI | 270307544 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAAAG TAGTGTTTTC GATATTACTT GCAATCGTTA TATCTATTCT GCCGGAAATG ACCACAGTTT CTGCAATAGA ACCCGTAAAC AAATATTTCC CAAATCAGGG TACTCTTGAT AGCACCTTTA AAACCCCACT TAGTCCCTCG GAAATAGTAG CCATGTACCC GATGTCCGCA GAAGAAGAAG CCAAAATTAT CCAAGTTATA CCCCAATGCC CTGTGAATGT AGATGGCACA TGGTACAGAG CGGAAGAAAT CACCCTTTTT AATGGGCAGC AACTCCATTT TACCACTGAT ACAACAGGAG CACTGTACGC TTTTACCGAT GCCAAAGCCA TGGAAACATT TCTTGAAGCG GAATACGGGA AAATATATGA CCTGCCATTT AATGGCAGTA TACAAAACCT GAGGCTTGAT CAAAGCGAAC TTTTTAAAGA CTGGATGTAC TCAGGCGAAC TTATGCAGCT TGCCCCGTTT ATACAGTTAT CCAATCTGGC ATCACTGGGG TGGGATGATT GCATATCTTC CGCCAAAATT TGCAGCACGG CACCGGTTAC ACTCTGGGAA TATTCCGGTT TTCAGGGCAA CAGCTTTACC ATGCCCGCAG ATTCCAATCA TGCAGCGTTA ACATTTGAAG GGTGGAATGA CAGGGCATCG TCTATATCTT AA
|
Protein sequence | MKILLVNPGT EYKPRFRTYA VFPNGLLYMA SVLEGAGHEV KVFDNVVSEL TPPDYARDFA PDVIGFSVLT GPCIGNALIQ SKEFKALLPG VKVVWGNVHA TCTTEQTLKE EAIDFVVRGD GEYTLLELVN RLEKGDGDYA GILGLAWKDK EGRITINQPR PFIHNLDELP DPAWHLIDVP KYWDITLNTS RGCPFKCSFC YNIPFHQGHR ADLSVERIVS QIEHLQKNYK VKFIRFFEDN FTFNRRRMRE FCRTIIERRI KIKWDTESRA DMSEEDVALM AKAGCTSVGI GVETGSKRML EYLNKGIDLD EMGHTFWRFV RHGIMPRLYI MLAVPSETPA DFKETQDMLR KMEDPPFMYM RFVPYPGTPL YEELVDNKRI KPPESLEEWA KFSVYFATRG NLSELSDEQI TQALSHWAHT YASRRVMFTL RHNPRYLLGA VKNPSEFFKA LGSLIKNSLP VAFNKNTNIK PLVLEAVPNK MSGKQEPRLI SNYD
|
| |