| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3362 |
|---|
| Symbol | |
|---|
| ID | 8650918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3722457 |
|---|
| End bp | 3723959 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | polynucleotide adenylyltransferase/metal dependent phosphohydrolase |
|---|
| Protein accession | YP_003327919 |
|---|
| Protein GI | 269958130 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGACCC CAGAGCAGGA CCTGCTGCTA CGTGCCCTGC GCACCCTGAC GTCCATGGCC
CCCGCCGCGA TCGAGCTGGG GACGCTGTTC CAGGCCGCCG GGCACGAGCT CGCGCTCGTC
GGCGGCCCGG TGCGCGACGC GTTCCTGGGC CGGGCGAGCA ACGACCTCGA CTTCGCGACG
TCGGCGACGC CCGACCAGAC GCAGGAGCTG CTGGCGCGCT GGGGCGACGC GCACTGGGAC
ATCGGCAAGG AGTTCGGCAC CATCGGCGCC CGCCGGTTCG GGCGCGGGGA GCAGGCGGCC
GACGTCGTCG TCGAGGTCAC CACCTACCGC ACCGACGAGT ACGACCCCGC CTCGCGCAAG
CCTGTCGTCG CGTTCGGGGA CACGCTCGAC GGCGACCTGT CCCGCCGCGA CTTCACCGTC
AACGCCATGG CGGTGCGGCT GCCGGACCTG ACCTTCGTGG ACCCGTTCGA CGGGCTGGGC
GACCTGGCCC GCGGGGTGCT GCGCACGCCC ATCGCCCCCG AGCGGTCGTT CGACGACGAC
CCGCTGCGCA TGATGCGCGC CGCACGGTTC GCCGCGCAGC TCGGCTTCAC GGTCGAGGCG
GGCACGCTCG CTGCGATCGT CGCGATGGCG GGCCGCATCG AGATCGTGTC CGCGGAGCGG
GTGCAGGCCG AGCTGTCCAA GCTGCTGCTG GCCGACAAGC CGCGCCGCGG CCTCGAGGTG
CTCGTCGACA CCGGGCTCGC CGAGCACGTG CTGCCCGAGC TGCCCGCGCT GCGGCTCGAG
ATCGACGAGC ACCACCGCCA CAAGGACGTC TACCAGCACA CCCTCACCGT GCTGGAGCAG
GCGATCGCGC AGGAGACCGG GCCTGACGGG CCCGTGCCGG GCCCCGACCT GGTGCTGCGG
CTGGCGTCGC TGCTGCACGA CGTCGGCAAG CCGGCCACGC GACGCTTCGA ACCGGGCGGC
GGCGTCTCGT TCCACCACCA CGAGGTGGTC GGCGCCAAGC TCGTCGCGCG GCGGCTCAAG
GCGCTCAAGT ACGAGAAGCA GGTGGTCAAG GACGTCGCCC GGCTCGTGGA GCTGCACCTG
CGCTTCCACG GCTACGGCGA CCCCTCTGGC GGTGCGGACG GGCCGGGCCG GTCTGGCGGT
GGTGCGGCGT GGACCGACTC GGCCGTGCGC CGCTACGTCA CCGACGCCGG CCCGCTGCTG
GAGCGCCTGC ACCGCCTCAC GCGCGCCGAC TCCACCACGC GCAACCGGCG CAAGGCCCAG
CGCCTCGCGG ACGCGTACAC GGACCTGGAG CGGCGCATCG ACGCCCTGCG CGCCCAGGAG
GAGATCGACG CCATCCGCCC CGACCTGGAC GGCACCCAGA TCATGGCGAT CCTCGGCATC
CCTCCGAGCC GCGAGGTGGG CCAGGCCTAC CAGCATCTCC TGGCCCTGCG CATGGAGCAC
GGCCCGCTCG GCCCCGAGCG GGCGGAGGCG GAGCTGCGCG CCTGGTGGGA CGCGCGCGGC
TGA
|
|---|
| Protein sequence | MSTPEQDLLL RALRTLTSMA PAAIELGTLF QAAGHELALV GGPVRDAFLG RASNDLDFAT
SATPDQTQEL LARWGDAHWD IGKEFGTIGA RRFGRGEQAA DVVVEVTTYR TDEYDPASRK
PVVAFGDTLD GDLSRRDFTV NAMAVRLPDL TFVDPFDGLG DLARGVLRTP IAPERSFDDD
PLRMMRAARF AAQLGFTVEA GTLAAIVAMA GRIEIVSAER VQAELSKLLL ADKPRRGLEV
LVDTGLAEHV LPELPALRLE IDEHHRHKDV YQHTLTVLEQ AIAQETGPDG PVPGPDLVLR
LASLLHDVGK PATRRFEPGG GVSFHHHEVV GAKLVARRLK ALKYEKQVVK DVARLVELHL
RFHGYGDPSG GADGPGRSGG GAAWTDSAVR RYVTDAGPLL ERLHRLTRAD STTRNRRKAQ
RLADAYTDLE RRIDALRAQE EIDAIRPDLD GTQIMAILGI PPSREVGQAY QHLLALRMEH
GPLGPERAEA ELRAWWDARG
|
|---|
| |