Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_3345 |
Symbol | |
ID | 8650901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 3703468 |
End bp | 3705156 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_003327903 |
Protein GI | 269958114 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCCGC TGAAGATCGT CGTCGTCGGC TCCGTCGCGG CGGGCACGTC CGTGGCCGCC AAGGCGCGCC GCAACACCGA GACCGCGCGG ATCACCGTCT ACGAGCGCGG CACCGAGATC TCCTACTCCG GGTGCGGGCT GCCGTACTAC GTCGGTGGCG ACGTCGAGCA GATCTCGGCG CTGACCCCGC GCAGCCCGGC GTGGTTCAAG GCCCGCTACG ACGTCGACAT CCGCACCGGT CACGACGTCG TCGCGGTCGA CGCCGGCGCG CGCACGATCA GCGTGAAGAA CCTCGCCACG GGCGAGACGT TCGAGGACGC CTACGACGAG CTCGTCCTGG CCACCGGCGT CTCGCCCGTC GTCCCGCCAG TTCCCGGCGT GGACCTGCCG GGGGTGTTCA CGGTGCGTAC CCCGTCCGAT GCCGCCGCGA TCCGCGCCTG GATCGAGGAT CGCGGCGTCA CCCGCGCCGT CGTCGTCGGA GCCGGGTACA TCGGCCTGGA GATGGCCGAG CAGCTCGCCC ACCGCGGGCT GGGCGTCACG GTGGTCGAGG CGCTCGACCA CGCCATGGCC CGCATGGACC CCGACATGTC CGCCCGCGTC GACGCCGAGC TGCGCAGGCA CGACGTCGAC CTGCGCCTGG CCACCCGCGT CACCGGCATC ACGGGCACGC CCGACGCCGC CACCGGTGTC ACCGTCGAGG GGCCCGACGG CGGGGGGCCC GACGGCGCGG CCTCGGTCGA CGCGGGCGTC GTGATCGCGG CCGTCGGGGT CCGCCCGAAC GTGGACCTGG CCCGCCAGGT GGGCGCCCGC ATCGGGCAGA CCGGCGCGAT CGCCGTCGAC CGCGTCGGGC GCACGTCCGT CGACCACGTG TGGGCGGTGG GCGACGTCGC CGAGTCCTTC CATCTCGTCA CCGGGCAGCC GACCTGGGTG CCGCTCGGCT CGACGGCGAA CAAGACCGGC CGTATCGCCG GCGACGCGAT CACCGGCGGA CGACTCGAGC ACCGCGGCAT CCTCGGCACG TCGATCGTGC GCGTCTTCGA CCTCGCCGTC GCCCAGACCG GCCTCACCCA GGCGCAGGCC GAGGCGGCCG GGTACGACGT CGAGGTGCTG CACAACATCA AGCCCGACCG CCCCGAGTAC CTCGGCGGGA AGTCGATGGT CATCAAGGCC GTCGCCGACC GCGGCACCGG CCGCCTCCTC GGAGCCCAGG CCATCGGGCC GTCCGGCGTC GACAAGCGCA TCGACGTCCT GGCCACCGCC ATCACCTTCG GCGCCGACGT CGCCGACCTG TTCCACCTCG ACCTGGCCTA CTCCCCCACC TACGCCACCA CCAAGGACCC GGTGCACTAC ACCGGCATGG CGCTCGACGG CGCGATCCAC GGGCATGCCC CGCTCATCAC CCCCGCCGAG TTGGAGACCC GCCGCAAGGC CGGGGAGAAG ATCCAGGTCG TCGACGTCCG CTCCGCCAAG GACCGCGCCA AGTCCCTCGT CGCCGGTTCG GTCCACCTCC CGCTCGACCA GCTCCGCGAA CGGTCCGGCG AGCTCGACCC GACCCTCGTC ACCGTGACGT ACTGCAACAA GGGCGTCACC GGCAACGCCG GCCAGAACGT GCTGCGCAAC CTCGGCTTCG AACGCGTCTA CAACCTGTCC GGCGGCAACC AGAACTGGCA GGCCTGGACC TCCGCCTGA
|
Protein sequence | MNPLKIVVVG SVAAGTSVAA KARRNTETAR ITVYERGTEI SYSGCGLPYY VGGDVEQISA LTPRSPAWFK ARYDVDIRTG HDVVAVDAGA RTISVKNLAT GETFEDAYDE LVLATGVSPV VPPVPGVDLP GVFTVRTPSD AAAIRAWIED RGVTRAVVVG AGYIGLEMAE QLAHRGLGVT VVEALDHAMA RMDPDMSARV DAELRRHDVD LRLATRVTGI TGTPDAATGV TVEGPDGGGP DGAASVDAGV VIAAVGVRPN VDLARQVGAR IGQTGAIAVD RVGRTSVDHV WAVGDVAESF HLVTGQPTWV PLGSTANKTG RIAGDAITGG RLEHRGILGT SIVRVFDLAV AQTGLTQAQA EAAGYDVEVL HNIKPDRPEY LGGKSMVIKA VADRGTGRLL GAQAIGPSGV DKRIDVLATA ITFGADVADL FHLDLAYSPT YATTKDPVHY TGMALDGAIH GHAPLITPAE LETRRKAGEK IQVVDVRSAK DRAKSLVAGS VHLPLDQLRE RSGELDPTLV TVTYCNKGVT GNAGQNVLRN LGFERVYNLS GGNQNWQAWT SA
|
| |