Gene Xcel_3293 details

Gene Information

• Locus tag: Xcel_3293
• ID: 8650849
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 3654145
• End bp: 3654933
• Gene Length: 789 bp
• Protein Length: 262 aa
• Translation table: 11
• GC content: 73%
• Product: Xylose isomerase domain protein TIM barrel
• Protein accession: YP_003327851
• Protein GI: 269958062

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATCC GCATCGGGGC GCACGTCGAC GGCGCCGACG CCGTCGCGCA GGCGCAGGCC 
ATCGGGGCCG AGGTGGCGCA GGTCTTCCTC GGCGACCCGC AGTCGTGGAA GGTCACCGGG 
TCGGGGTACC CGGGCGGTGA GGAGGCGCTG CGTGAGGACG CGGCCGCCGC CGGCATCGAC 
CTGTACGTGC ACGCCCCGTA CGGCATCAAC GTCGCCTCGA CCAACAACCG GATCCGCATC 
CCGAGCCGCA AGCTGCTGCA GGCCACGCTC GAGGGGGCGG CAGCGATCGG CGCCCGCGGC 
GTCGTCGTCC ACGGCGGGCA CGTGACCGGG AAGGACGCCC CCGAGGTCGG CTTCGACAAC 
TGGCGCAAGG CCATCGACTC CCTCGACACG GACGTGCCGG TGCTCATCGA GAACACGGCC 
GGCGGCGACT TCGCGATGGC CCGCCACCTG GAGCGCATCG AGCAGCTGTG GGCGGCGGTG 
CAGTCGAGCA CGAACGCCAG CGTCGTCGGG TTCACGCTCG ACACCTGCCA CGCGTGGGCG 
GGTGGCATCG ACCTGGCCAC CGCCGTCGCC GACATCCGGG CGATCACCGG CCGCATCGAC 
CTGGTGCACG CCAACGACTC GCGCGACACC GCCGGGTCAG GTGCCGACCG GCACGCCCAC 
TTCGGCGCGG GCCAGATCCC GCCCGACCTG TTGACAGGCG TCATCGCGGC CGCGGGCGCC 
CCGGTCGTGT GCGAGACGCA CGGCGACATG ACCCCGGACA TCGCCTGGCT CCAGGACCGC 
CTCGTCTGA 

 

Protein sequence

MSIRIGAHVD GADAVAQAQA IGAEVAQVFL GDPQSWKVTG SGYPGGEEAL REDAAAAGID 
LYVHAPYGIN VASTNNRIRI PSRKLLQATL EGAAAIGARG VVVHGGHVTG KDAPEVGFDN 
WRKAIDSLDT DVPVLIENTA GGDFAMARHL ERIEQLWAAV QSSTNASVVG FTLDTCHAWA 
GGIDLATAVA DIRAITGRID LVHANDSRDT AGSGADRHAH FGAGQIPPDL LTGVIAAAGA 
PVVCETHGDM TPDIAWLQDR LV