| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3287 |
|---|
| Symbol | |
|---|
| ID | 8650843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3650829 |
|---|
| End bp | 3651650 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_003327845 |
|---|
| Protein GI | 269958056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC GGTATGCGCA CTGGGATGCC GCCTACGTGC TCGGCGCCCT CGGCCCCGCC
GAGCGCCGCG AGTACGCCGC CCACCTCACG GCGTGCGAGG CGTGCCGCAC GGCCGTCGCG
GAGATCGCCG CGCTCCCCGG GCTGCTGGCG TCGGTCCCGG CGGACCTGCT GCCGGTGGAT
GCGCCGCCCA CCGCCGGGCC GCCCGCCGCC GCGCTGCCCG TAGGGGGCGG TCCCGACGCG
TCCGGCGCAC GGGCAGCGGC CGGTCCGGGA TCAGCGGCCA GGGCCGGAGA TGTTGTGCCG
TTCGCCCGGG TGGCCGCCGC GGCGCGGCGC TCGCGGCGAC GCCGTCGTGC CGGGTTGGTC
GCGGTGGCGA CCGTCATCGC CGTCGGTGGC GTGCTCGCCG GATCCGCGCT GAGTCCTGGC
TCCGAGTCAG GCCCGACGAC GCCGACGCCG ACGTCGTCGG CTGCGGTGGC CGGGACGGTG
ACCCTCCAGC TTGCCCCCGT GGGCGACACG GGGATGTGGG CGGACCTGGT CGCGACGCCG
ACGCCGTGGG GGACCAGCCT GGCGTGGAGC TGCCGGTACG AGCGGCAGGC CGGCGCGGCG
GACGGGCCGG ACGGCGGCTA CGGCGGCGGC CCGGAGCCCG TCACCTACGA GCTCGTGCTC
GTCGACCGCA CGGGCGCGCG CATCGTCGCC GCCACCTGGA CGACGGCAGA CCAGGAGGCC
ACGGGCCTCG GCGCGTCGTC GGCGCTACCG CTCTCGTCGC TGGAACGCAT CGAGATCGCC
ATCGCGGGGC GCCCGGAGCC ACTGGCAGCG GCAACGCTGT AG
|
|---|
| Protein sequence | MTDRYAHWDA AYVLGALGPA ERREYAAHLT ACEACRTAVA EIAALPGLLA SVPADLLPVD
APPTAGPPAA ALPVGGGPDA SGARAAAGPG SAARAGDVVP FARVAAAARR SRRRRRAGLV
AVATVIAVGG VLAGSALSPG SESGPTTPTP TSSAAVAGTV TLQLAPVGDT GMWADLVATP
TPWGTSLAWS CRYERQAGAA DGPDGGYGGG PEPVTYELVL VDRTGARIVA ATWTTADQEA
TGLGASSALP LSSLERIEIA IAGRPEPLAA ATL
|
|---|
| |