| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3280 |
|---|
| Symbol | |
|---|
| ID | 8650836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3643970 |
|---|
| End bp | 3644911 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | 5'-3' exonuclease |
|---|
| Protein accession | YP_003327838 |
|---|
| Protein GI | 269958049 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTTC TTCTGCTGGA CACCGCGTCG CTGTACTTTC GGGCCTTCTA CGGCGTGCCT
GACTCGTTGC GCTCGCCGCG CGGCGAGCCC GTGAACGCGA TCCGCGGGCT GCTGGACACG
ATCGCGTTCC TGGTCACCGA GCACCGGCCC GAGCGGCTCG TCGCGTGCTG GGACGACGAC
TGGCGGCCAC AGTGGCGGGT GGACCTCATC GGGTCCTACA AGGCGCACCG CGTCGCCGTG
CCCGACGCGG GCCCGGGCGG CACCGACGTC GAGGAGGTGC CCGACCTGCT CTCCCCGCAG
GTGCCGGTCA TCGCGTCCGT GCTGGAGGCG ATCGGTATCG CACGGATCGG CTCGCCGGGC
TTCGAGGCCG ACGACGTCAT CGGCACGCTG GTGGCCCGCG AGGTCGCGGC AGGGCGCCGG
CCGACGTCGA TCATGACGGG CGACCGTGAC CTGTTCCAGC TCGTCGACGA CGACGCGGGC
GTGCGCGTCC TGTACCCGGC GCGCGGGGTA CGCGACCCCG ACGTCGTCGA CCAGGCGCGG
CTCGCCGAGA AGTACGGGGT GCCGTCCGGC GACGCGTACG CCGACATGGC CGTGCTGCGC
GGCGACCCCT CCGACGGGTT GCCCGGCGTC GTCGGGATCG GCGAGAAGAC GGCGGCAGGG
CTGCTCGCCC GGTTCGGCAC GCTCGACGGG GTTCTCGCCG CGCGCGACTC CGGGTTCGGG
CTCACGCCCG CGCAGCAGCG ACGGCTCACG GAGGCGGCGG AGTACCTCAC GGTCGCCCCG
ACGGTGGTCC GGGTGGCGAC CGACGCTCCG CTGCCCGACT TCGACGACGC GCTGCCGCGG
GCGGCCGCCT ACCCGGAGGC GCTGCAGCTC CTCACCGAGC GTTGGGGGCT GCGCAGCAGC
GTCAGCCGCG TGCTGACGGC GCTGGCCGCC TCGGGTGGTT GA
|
|---|
| Protein sequence | MSLLLLDTAS LYFRAFYGVP DSLRSPRGEP VNAIRGLLDT IAFLVTEHRP ERLVACWDDD
WRPQWRVDLI GSYKAHRVAV PDAGPGGTDV EEVPDLLSPQ VPVIASVLEA IGIARIGSPG
FEADDVIGTL VAREVAAGRR PTSIMTGDRD LFQLVDDDAG VRVLYPARGV RDPDVVDQAR
LAEKYGVPSG DAYADMAVLR GDPSDGLPGV VGIGEKTAAG LLARFGTLDG VLAARDSGFG
LTPAQQRRLT EAAEYLTVAP TVVRVATDAP LPDFDDALPR AAAYPEALQL LTERWGLRSS
VSRVLTALAA SGG
|
|---|
| |