Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_3226 |
Symbol | |
ID | 8650780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 3576305 |
End bp | 3577876 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003327784 |
Protein GI | 269957995 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCTCCG CGACCGACAC CGTCGACGTG ATCGGCGGGC ACTCGCTCAC CAAGGTCGAC AGCGTGGACG TCGGCCGAGC CGCCGCGCAC GCCCAGCACG CGTCGGACCG GCTGCGGGTG GCCGCGTTCC GCCTCGGCCG GGCGTCCGAG GAGCTCGAAC GCACCGCCTG GGTGCCGCCC GCGGACGTGC GGTCGGACGG CATCTGCGAC GTCGGGCCGG CCCGCCTGTA CCGCAGCCTC GCCGCCGAGA CCCAGGCGCT CGCGCGACGG TTCGCCGGTG ACGCCGACGA CTGCGCGCAC ATGGCCGAGC TCCTGCTGCG GGCCGCCGGG CTGTACGAGT ACGGCGAGTC GTTCGCCGAA CGTGTGATCG GCGCGGCCGT CCAGAGCTGG TTCGCCCAGC TCGGGTTCCG GCTCACGTCG CCGCTGATCG TCCTGGACGT CGCCGTGATC GCGCCGGGGG TCGTGAGCGC GGGCGCCCAG CTCTGGCTCG CGAACCGCCT GACCGACGGT CAGGCGGGCC GCTGGCTCGC GGCCGCCGCC GGCACGGCCG GCTCCCAGGC CGTCCGCCAC ACCGCCGCGT GGACCGACGA AGCCGTCGCA GGGCTGGGCT CCGGTCTCAT GGTCGGCCTG CCTGCGTCGT GGGGTGTCGG GGACCTGTCC GTCACCGGAG CCGCACACGT GCTCTCCGCG CTGGTCCACC TGTTCCTGGG ACGCACCCGC GTGGACGTCA CCGAGGTCAC GCCCGACGGC GCAGGCCCCG GCTGGCAGCA GACGGCCGCG GGCAGCATCG GGGAGTCGCT CGCCCGCGTC GCCGACATCA CCGGCAACGG CACCCTGCCC GGGCGCACCG CGGCCGGAGT GCCCGCCGGG ACGGTCGGTG TCGAGCGCGT GGTGCACGAC GACGGAACGG TCACCTGGGC CGTGCTGATC CCGGGCACCC AGGCACTGGT CAGCACCGAG CACCCGTTCG ACGGGGTCAG CGACCTCGAC CTCATGGCGG GCCACGCCGC CGACATCACC GCGGCCGTCG CGGCGGCGCT CGAGGCGGCC GGTGCGGCGC CCGACGAGCC GGTGGTGCTC GTCGGGCACA GCCTCGGCGG GATCGCCGCG ATGGCGCTCG CGTCGTCGGC GGCCTTCCGC GCGAAGCACC CCGTCGGCGC CGTCGTCACC GCCGGGTCCC CGACCGCCAC CTTCACCACG CCGAAGGGTG TGCCCGTGCT GCACCTGGAG AACGACGAGG AGCTCGTCTC CAACACCGAC GGGCGCTCCG GGCTGGAGAA CCCGGCCACC CCCGACCGGG TCACCGTCAC GCGGCGCCTG GGGGCGTCGT CGTCGGGCGC CGACCGTGCC GCGGCTGGTT CCGTCGTCGC CGCCCACGGC ATCCGCACGC ACCTGCGCAC GCTCTTCATG GCGCAGCGCA GCGGCAACGT GCAGGTCGCC GGCGCCGTCG AACGGATCGA GCCCTTGCTG CAGGGGCGCT CGGACGGGAC GCGGTTCTAC GCGGCGCAGC GCCTGCCGGC CGACGAGCCG GCGGGGCTCA GCGGCGGCGC TTCGGGGCGA ACGACCCGAT GA
|
Protein sequence | MSSATDTVDV IGGHSLTKVD SVDVGRAAAH AQHASDRLRV AAFRLGRASE ELERTAWVPP ADVRSDGICD VGPARLYRSL AAETQALARR FAGDADDCAH MAELLLRAAG LYEYGESFAE RVIGAAVQSW FAQLGFRLTS PLIVLDVAVI APGVVSAGAQ LWLANRLTDG QAGRWLAAAA GTAGSQAVRH TAAWTDEAVA GLGSGLMVGL PASWGVGDLS VTGAAHVLSA LVHLFLGRTR VDVTEVTPDG AGPGWQQTAA GSIGESLARV ADITGNGTLP GRTAAGVPAG TVGVERVVHD DGTVTWAVLI PGTQALVSTE HPFDGVSDLD LMAGHAADIT AAVAAALEAA GAAPDEPVVL VGHSLGGIAA MALASSAAFR AKHPVGAVVT AGSPTATFTT PKGVPVLHLE NDEELVSNTD GRSGLENPAT PDRVTVTRRL GASSSGADRA AAGSVVAAHG IRTHLRTLFM AQRSGNVQVA GAVERIEPLL QGRSDGTRFY AAQRLPADEP AGLSGGASGR TTR
|
| |