| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3190 |
|---|
| Symbol | |
|---|
| ID | 8650744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3532856 |
|---|
| End bp | 3533911 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | Pirin domain protein |
|---|
| Protein accession | YP_003327748 |
|---|
| Protein GI | 269957959 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC TCGAGACCCG CCCGACGGAG CAGGTCTGCA CTGCGGGAGA CACTGCTGCG
GGCGACACTG CTGCGGGCGA CGTCGCGACG GGCGTCCAGC TGCTCACCGC GCGCGACGTG
CCGCTCGGCG GCCCGCGTGC GATGACCGTG CGGCGCACCA TCCCGCAGAA GGTCCGCTCG
CTGGTCGGCG CGTGGTGCTT CTGCGACCAC TACGGGCCCG ACGACGTCGC CCGGTCGGCG
GGGATGCAGG TGCCGCCCCA CCCGCACACG GGGCTGCAGA CGGTGACCTG GTTGTTCGCC
GGCGAGATCC TGCACCGTGA CTCGGTGGGC TCGCTGGAGA CGGTGCGGCC CGGGGAGCTG
AACCTGATGA CAGCAGGGCA GGGCATCTCG CACAGCGAGG AGTCGCCTGC GCAGGGCCGC
CCGCCCGTCC TGCACGGCGT CCAGCTCTGG ACGGCGCTGC CGTCGTCGGC ACTCGGGGTC
GAGCCGCACT TCGAGCACCA CGCTGACCTG CCGGTGGCCA CGCTGGACGG CGGGCAGGTG
CGGGTGTTCA TGGGCGAGCT GGGTGCCTTG GCCTCCCCGG CCCGCACCTA CTCGCCGCTG
GTTGGTGCCC AGGTCGACCT GGAGCCCGGC GGCCGGGTGG AGCTCGACGT CGATCCCACC
TTCGAGCACG CCCTGCTGGT CGACGTCGGG AATGTCACGT TCGCCGGCGT CGTCGTGCCG
CGGGACCAGC TCGGCTACGT GGCCCCCGGG CACGGACGGC TGGTGATCGA GGCCGGGCCG
GACGCCCCGG CCCGCACGAT CCTCATCGGC GGCGTGCCGT TCGAGGAGGA CATCGTCATG
TGGTGGAACT TCGTCGGCCG CTCGCACGAC GACGTCGCCC GTGCCCGCGC GGACTGGATG
GCGCAGGTGG CCGACGCCGG CCCCGGCGGC GGGACCCGTT ACACGGACGG CGCGGCCGGA
CGCCGCTTCG GCGTCGTCGA GGGCTACGCG GAAGGCCCGC TGCGCGCCCC GGCCCTCCCG
GACGTCCGGC TGCGCCCGCG CTCGCGCGGC GTGTGA
|
|---|
| Protein sequence | MSNLETRPTE QVCTAGDTAA GDTAAGDVAT GVQLLTARDV PLGGPRAMTV RRTIPQKVRS
LVGAWCFCDH YGPDDVARSA GMQVPPHPHT GLQTVTWLFA GEILHRDSVG SLETVRPGEL
NLMTAGQGIS HSEESPAQGR PPVLHGVQLW TALPSSALGV EPHFEHHADL PVATLDGGQV
RVFMGELGAL ASPARTYSPL VGAQVDLEPG GRVELDVDPT FEHALLVDVG NVTFAGVVVP
RDQLGYVAPG HGRLVIEAGP DAPARTILIG GVPFEEDIVM WWNFVGRSHD DVARARADWM
AQVADAGPGG GTRYTDGAAG RRFGVVEGYA EGPLRAPALP DVRLRPRSRG V
|
|---|
| |