| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3146 |
|---|
| Symbol | |
|---|
| ID | 8650699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 3484453 |
|---|
| End bp | 3485832 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase family 6 |
|---|
| Protein accession | YP_003327705 |
|---|
| Protein GI | 269957916 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCC GACGCCATCG TCTCGCGACC CTGGCCGCCG CCGTCTCGCT GGCCGCGGCC
GGCGCCGTCG TGACCGCGAC CAGCGCCAGC GCGGCTCCCG GCTGCGCCGT CACCTATCAG
GTCGCCAACG CGTGGCAGGG CGGCTTCCAG GGCGACGTGA CCGTGGAGAA CGTGGGCGAT
GCCCTCTCCT CGTGGACCCT GGAGTGGACG GCCGCCGCCG GGCAGGGCGT GGACCAGGCG
TGGAACGCCA CCGTGTCGCA GTCCGGCAAC CAGGTGACCG CGACGAACGT CGCCTGGAAC
GGGTCGCTCG CCACGGGGGC GAGCGCGTCG TTCGGCTTCA TCGGGTCGGG CAGCTCGACG
CCGGTGCCGA CGTCGTTCAC CGTCAACGGC GTGACGTGCA CGGGTTCGGT GACGACGCCG
ACCCCGACGC CCACTCCGAC ACCTACTCCC ACTCCGACGC CGACGCCGAC GCCGACGCCG
GACCCCACGC CTACCCCCAC CCCCACTCCC ACTCCGACGC CGACCGTGCC GCCGGTCGAG
GCCGGCGAGC TCTACGTCGA CCCGACGACG CAGGCGTACG CCGCGTGGGA GGCGGCATCG
GGCGCCGACA AGGCGCTGCT GGAGAAGATC GCCCTGACGC CCCAGTCCTA CTGGGTGGGC
AACTGGGCGG ACGCCGCGCA CTCGAAGGCC GAGGTCGTCG ACTACACCTC CCGGGCGGTC
GCCGCGGGCA AGACCGGCAT CCTCACCGTC TACGCCATCC CCGGCCGCGA CTGCGGCAAC
CACTCCGGCG GCGGCGTCGA GACCAGCGAG TACGCCGCCT GGATCGACAC GGTGGCGTCG
GGCATCCAGG GCCGCCCGTA CGTCGTCCTC GAGCCGGACG CCCTCCCCCA GCTCGGTGAC
TGCGACGGCC AGGGCGACCG CGTCGGCTAC CTGAAGTACG CGGCCGAGAA GCTGACCGCC
GCGGGCGGCC GCGTGTACAT CGACGCCGGT CACTCGGGGT GGATGGGCGT GGGCACCGCC
GTCGAGCGGC TGAACCAGAT CGGGTTCGAC CACGCCGTCG GCTTCGCGCT CAACACCTCG
AACTACCAGA CGACGGCCGA CAGCATCAGC TACGGCGAGC AGATCTCGCA GCAGCTCGGC
GGACGCCCGT ACGTGATCGA CACCTCGCGC AACGGCAACG GCTCCAACGG TGAGTGGTGC
AACCCGAGCG GGCGCGCCCT CGGCGAGAAG CCGCGGGTCG TGAACGACTC CACGGGCCTC
GACGCCCTGC TGTGGATCAA GCTGCCCGGC GAGTCCGACG GTTCGTGCAA CGGCGGCCCG
GCCGCCGGCC AGTGGTTCGG TGCGATGGCC CTCGAGCTGG CACGCAACGC GGCGTGGTGA
|
|---|
| Protein sequence | MTTRRHRLAT LAAAVSLAAA GAVVTATSAS AAPGCAVTYQ VANAWQGGFQ GDVTVENVGD
ALSSWTLEWT AAAGQGVDQA WNATVSQSGN QVTATNVAWN GSLATGASAS FGFIGSGSST
PVPTSFTVNG VTCTGSVTTP TPTPTPTPTP TPTPTPTPTP DPTPTPTPTP TPTPTVPPVE
AGELYVDPTT QAYAAWEAAS GADKALLEKI ALTPQSYWVG NWADAAHSKA EVVDYTSRAV
AAGKTGILTV YAIPGRDCGN HSGGGVETSE YAAWIDTVAS GIQGRPYVVL EPDALPQLGD
CDGQGDRVGY LKYAAEKLTA AGGRVYIDAG HSGWMGVGTA VERLNQIGFD HAVGFALNTS
NYQTTADSIS YGEQISQQLG GRPYVIDTSR NGNGSNGEWC NPSGRALGEK PRVVNDSTGL
DALLWIKLPG ESDGSCNGGP AAGQWFGAMA LELARNAAW
|
|---|
| |