| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3114 |
|---|
| Symbol | |
|---|
| ID | 8650667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 3451644 |
|---|
| End bp | 3453080 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003327673 |
|---|
| Protein GI | 269957884 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA TGTACACGAA GGCCGTCAAC ACCGGCCTCG GCAAGACCGT CGCCGCGAAG
CTCGGCCTGC CGCGCCCCGC GCTGCTGCGC CGCCACCAGC CGGGTGCGAC GCTCACGGTG
GGCCCGGTCC TGCTGGTCGC CGACGCCGCG AGCGCCACGA CCGCCACCGC CGTCGGCGGC
GTGCTGCGCG GGTGGGGACT GGACGTCACC GACCGGTTCG AGGGTTCGGT GCCGGATCGT
GGGCCCGAGC CCACGAACGG ACACCCGACC CACGAATCGG TCGCGGCTGC CGAGGGTGAG
ACCCGCTGGG GTGCCATCGT GCTGGTGGTC AGCGAGGTGG CTCGCCCTGC GGACGCCTCC
GCGGCGGTGC TCGCGCTGCC GAAGGCGCTC AAGCGGCTCG CGCCGCACGG GCGCGTGGTC
ACCGTCTCGC GGGCCGCGGC CCCGGGTGAC GCCCCGGAGC TCGCGGCGGC ACGGCGCGGG
TTCGACGGGT TCCTCCGGTC GCTCGCCAAG GAGCTACGGG CGGGGGCGAC GGGCAACGGC
ATCGTGCTCG CCGACGGCAT CCCCGCCGAC CACCCGTCGG CTCGCGCGGC CCTGCGGTTC
TTCCTCTCGG CGAAGAGCGC GTTCGTGGAC GGCCAGCTCC TGACCGTGGG CAGCGCGGAC
GCCGGGCACG TCGAGAGCGC CCAGGCGTGG GAGCGCCCGC TGGAGGGCAA GGTCGCCGTC
GTCACCGGGG CCGCCCGCGG CATCGGCGCC GCCATCGCCA AGACCCTCGC GCGCGACGGC
GCCACCGTCG TCTGCGTCGA CGTGCCCGCC GCGGGCGAGG GCCTGGCCCG CACCGCCAAC
GCCGTCCGCG GCACCGCGCT CCAGCTCGAC GTCACCGCGC CCGACGCCGG TGAGCGCATC
ATCGAGCACG CCCGCACCCG CCACGGCCGC CTCGACGTCG TCGTGCACAA CGCCGGCATC
CTGCGCGACA AGCTGCTGGC CAACATGGAC CCCGCGCGCT GGGACTCCGT CGTCGCGGTC
AACGTCGAGG CGCAGCTGCG CATCAACGAG GCGCTCCTCG CGGCCGCCGC ACGCGGCGAC
GTCGACGGGC TGCGCATCGT CTCGCTCGCC TCCACCAGCG GCATCGCGGG CAACCGCGGG
CAGACCAACT ACGGGTTCAC CAAGGCCGGG GTCATCGGGC ACACCGAGGC GACGGCCGCG
CTGCTGGCCG AGCACGGCGG CACGGCCAAC GCCGTCGCGC CCGGGTTCAT CGAGACCGAC
ATGACGCGGC ACATCCCGTT CGTGCCGCGG CAGGTGGCGC GCCGGGTGAA CTCGCTGCAG
CAGGGCGGTC AGCCGGTCGA CGTCGCGGAG GCCGTCGCCT TCCTCGCCTC GCCGCTCGCG
GCGGGCGTCA CCGGCCAGAC GCTGCGGGTC TGCGGGCAGA ACATGGTCGG GCGATGA
|
|---|
| Protein sequence | MTDMYTKAVN TGLGKTVAAK LGLPRPALLR RHQPGATLTV GPVLLVADAA SATTATAVGG
VLRGWGLDVT DRFEGSVPDR GPEPTNGHPT HESVAAAEGE TRWGAIVLVV SEVARPADAS
AAVLALPKAL KRLAPHGRVV TVSRAAAPGD APELAAARRG FDGFLRSLAK ELRAGATGNG
IVLADGIPAD HPSARAALRF FLSAKSAFVD GQLLTVGSAD AGHVESAQAW ERPLEGKVAV
VTGAARGIGA AIAKTLARDG ATVVCVDVPA AGEGLARTAN AVRGTALQLD VTAPDAGERI
IEHARTRHGR LDVVVHNAGI LRDKLLANMD PARWDSVVAV NVEAQLRINE ALLAAAARGD
VDGLRIVSLA STSGIAGNRG QTNYGFTKAG VIGHTEATAA LLAEHGGTAN AVAPGFIETD
MTRHIPFVPR QVARRVNSLQ QGGQPVDVAE AVAFLASPLA AGVTGQTLRV CGQNMVGR
|
|---|
| |