| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3104 |
|---|
| Symbol | |
|---|
| ID | 8650657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3438755 |
|---|
| End bp | 3440263 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_003327663 |
|---|
| Protein GI | 269957874 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACGG TAGAGGCCGA GCCGACCGGC CCGTCGCCAG AAGGCGGTCT GGCCCGCCGC
GCGACCGCGA GCGTCGCCTG GAGCGCCTCG CAGCAGTGGG TGATCCGGAT CACCGGCCTC
GTCACGGTCG CGATCCTTGC GCGAGTCCTG TCGCCGGCCG ACTTCGGCGT CGTGGCCGTG
GCCATGTCCG TGCTGACACT CGTGCACCTG CTCGCCGACA TGGGCTTCGC CACCTACCTC
GTCCAGGCAC AGGACCCGAG CCGGCGCACG CTCAGCACCG CGTTCTGGTA CTCGGTGGCA
GCGGGAACGG CACTGACGGT GGGGCTCGTC CTGCTCGCCC CGCTCCTGGC GCAGCTGCTG
GACACCCCCG AGGTCATTCC CGTCCTGCGG GCCCTGGCCG CGAGCGCGCT TCTCGTGACG
CTCGGAAGCG TGCCGATGGC GCTGCTCCGA CGGGAGCTGC GGTTCCGCGC CCTCGCGATC
CAGGCGGTCG CGGCAGGGCT GATCGGTCAG ATCGTCGCCA CCGTCCTGGC ATTGACCGGG
TTCGGGGTGT GGGCGCTGGT CGCGCAGGCG CTGGTGTACC AGCTGCTCGT CACCGTGATG
GCGTGGGTGG CATCCCGCTG GACGGTGACC TGGCAGTTCT CGCGCGCGGA GTTCGTCGTG
ATGCTGCGGT TCGGGCTCAA GGTGCTGGGG ACCGACGTCT TCGCCGTCGC CCGGGTCACC
ATCGAGAACG CGATCGTCGT CGCCGCGCTC GGCGTCTCCG GGCTGGGATA CCTCAGCATC
GCCCAGCGCC TGGTGTCCAT CGCGCACGAC CTCACCACGA CACCGGTCGC GACGGTCTCG
CTCGCGGTGT TCGCCAAGAT CCGGGACACG ACCGAGAGGT CGCTGTCCGG ATACGTCCGC
GCGCAGAACA TGGCCCACGC CCTGGTCGCT CCCGTGATGC TGCTCATCGC TCTGGGCGCA
CCCTTCCTGC TGCCCCTGCT GTTCGGGTCG CAGTGGGGTG TCAGCATCGT CCCCGCCCAG
ATCCTGGCGC TCGCGGGCGT GCTCACCCTC AGCGGGCTCG ACCGGGGTCT GTTCCTCGGC
CGCGGCCGGC CGGGCACGTG GTTCGTCTAC GTCCTGATCG TGGACAGCGT GACCATCGGC
GTCACGGCGC TGACCGTGCC GCACGGTCTC GTCGCCTACG CGTACGGGTT CCTCGCCGTC
GCCGCCGTCG CCACGGCGGC GCGGTGGGTG CTGGTGGGGC GGCAGCTGGA TGCGTCCTGG
TGGACGATCT CGGGGCCGCT GCGCCGGGTG CTCGTCGCGA TGGGTGCGGC CGGGGCCGCC
GGTATCGGGG CGAACGCCCT GGCGAGCGGG CTCGGCGCCT GGTGGCGCGT GATCATCATG
ACCGTGGCGG TCGTGGTCGT CTACGTGCCG ATGGTCCGGC TCATGCTCCC CAACGCGTGG
CGGGAACTGA CCGGGTTCGC CGTCTCGCTG CTGCGGCGTC GTCGGCCACG GGAGAGGGAG
GCAGTGTGA
|
|---|
| Protein sequence | MSTVEAEPTG PSPEGGLARR ATASVAWSAS QQWVIRITGL VTVAILARVL SPADFGVVAV
AMSVLTLVHL LADMGFATYL VQAQDPSRRT LSTAFWYSVA AGTALTVGLV LLAPLLAQLL
DTPEVIPVLR ALAASALLVT LGSVPMALLR RELRFRALAI QAVAAGLIGQ IVATVLALTG
FGVWALVAQA LVYQLLVTVM AWVASRWTVT WQFSRAEFVV MLRFGLKVLG TDVFAVARVT
IENAIVVAAL GVSGLGYLSI AQRLVSIAHD LTTTPVATVS LAVFAKIRDT TERSLSGYVR
AQNMAHALVA PVMLLIALGA PFLLPLLFGS QWGVSIVPAQ ILALAGVLTL SGLDRGLFLG
RGRPGTWFVY VLIVDSVTIG VTALTVPHGL VAYAYGFLAV AAVATAARWV LVGRQLDASW
WTISGPLRRV LVAMGAAGAA GIGANALASG LGAWWRVIIM TVAVVVVYVP MVRLMLPNAW
RELTGFAVSL LRRRRPRERE AV
|
|---|
| |