Gene Xcel_3054 details

Gene Information

• Locus tag: Xcel_3054
• ID: 8650603
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: -
• Start bp: 3381755
• End bp: 3383881
• Gene Length: 2127 bp
• Protein Length: 708 aa
• Translation table: 11
• GC content: 75%
• Product: transport system permease protein
• Protein accession: YP_003327614
• Protein GI: 269957825

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCCA CGAAGACTGC CCCCGACGCG CCACCGCAGG TCGGAGACCT CGCGGCGACG 
CCGCGGCTCC CCGGCTGGGC CACGGGAACG GCAGCCGTGC TCGCCCTCGT CGTCGCCGTC 
GTCCTGGTCG GAGCCTGGCA TCTGACCCAG GGCACCTCGG ACGTCGGCCC GCGTGAGCTG 
CTCGGGCTGC TGACCGGCAG CGACGGTGAC GTGGCGGTCC GCAACATCCT CGTCGGCTCA 
CGCCTGCCGC GCCTTGCGGC AGGCGTGAGC GTCGGCTTCG CGCTCGGGGT GGCCGGTGCT 
CTCTTCCAGT CCATCTCGCG CAACCCCCTC GCCTCGCCCG ACACTCTCGC GGTCACCGCG 
GGCTCCTACC TTGCGATCGT TGCCGTCGCA GCCTTCGGTC TGACCGTGCC GTTCTGGGCG 
TCAGGGGCGG TCGCCTTCGC CGGCGGGCTC GCAGCCGCTG CGCTCGTGCT CGGCCTCGCC 
GGCGGGGCCG GTGCCGGCGG AAGCCGCCTG GTCCTGGCAG GCGCCGCCGT CGCGATGGCC 
CTGCAAGCCG CCGTCTCGGC CCTGCTGATC CTGTTCCAGA CCGAGACGAC CGGGCTGTTC 
GCCTGGGGCA GCGGCTCGCT GAGCCAGCTC GACCTCACCG CGTTCTGGCG CGCCCTGCCC 
GTCGTCGTCA TCGCCTCGAC CGGCGGGCTG CTGCTCTCGC GTCGTCTCGA CGTGCTCGGC 
CTCGGTGACG ACACGGCCGG GGCGTTGGGC GTACCCGTCC GCGCGACCCG TGCCATCGGT 
GTGCTGCTCG CCGTCGTCCT GACCGCCGCG GCCATCACGC TTGCCGGACC GATCGGCTTC 
GTCGGCCTTG CCGCACCCGT GGTGGCCCGC CTGCTCTCGC GCGTCGTCCC CGCCCTGAAC 
CGGCACGCGT TCCTCCTGCC GACCGCGGGC CTGCTCGGCT CGCTCGTCGT CGTGCTCGCC 
GATGCGGTGG TCCGTTCCCT GCTGGGTGCG CAGGCGGCGC TCGCCGTGCC CACCGGGGTG 
GCGACCACGA TGGTGGGCGC CGTGATCATG GTGTTGCTCG CCCGTCAGCT CCGCGACGCC 
GGACCGACAC GGCGGCCGCC CGCCGCGGTC GGCGGGCCGC GCAGCACGCG GCGCTTCGTC 
CTCGTGCTGA CGTCGGTGGC GGTGCTCGCC GTCGTCGTCG TCGTCGCCGG GCTGCTTGCC 
GGGTCGACGT GGCTGCGCAC GGGGGACATC GCCCTGTGGA TGCAGGGCGA AGGCCCCGCC 
GTGGTGCGGT TCGCCCTCGA CGAGCGGGCG CCCCGCGTCG CGGCTGCCGT GGTGGCCGGG 
GCGGCACTCG CGCTGTCCGG CACGATGGTG CAGGCCACCG CGCGCAACCC GCTGGCCGAG 
CCCGGCATCC TCGGCATCAC CGGAGGCGCC GGCCTCGGCG CGGTGATCGT CGTGACCACC 
GTCGCCGGCA CCGCCTGGGG CAACGGGATC GCGGCCGGCA CCGGCGCCAC GCTGATCGCG 
GCGGTCATCG GAGGCATGCT CGCGTTCGCG CTGGTCTACC TGCTGGCGTG GCGATCCGGG 
CTCCTCGCCG ACCGGCTCGT GCTCGTCGGC ATCGGCCTGT GGAACCTGAC GGCGGCCCTG 
ACGACCTTCC TCCTCCTGCG CTCCGACCCG TGGAACACGC CCCGCATCTA CACCTGGCTG 
TCCGGCACCA CCTACGGGCG CGACTTCGCC GAGGTGCTGC CCCTCCTGGT GCTGCTGGCC 
CTCGCCATCC CGCTCGCGAC GTCGATGCCA CGCGAGCTGG ACCTGCTCGC TCTCGACGAC 
GACACCCCCC AGCTGGTGGG CATCGGGCTC GAACGGACCC GGCTCCTCGT GCTCGCCGCC 
GCCGCAGCCC TCGCCGCCAC GAGCGTCACC GCCGTGGGCG TCGTCGGGTT CGTGGGTCTG 
GTCGCACCCC ACGCGGCGCG CGCCCTGGTC GGTGGCCGGC ACGCCCGGGT GCTGCCCGTG 
GCCATGCTGC TGGGGGCCGT GTTCCTGGGC CTGGCCGACC TGCTGGGCCG CACCGTCATC 
GCGCCCGCCC AGCTGCCCGC CGGGCTCGTC GTCGCGCTGC TCGGGGCGCC CTACTTCGTG 
TGGCTGCTGG CACGATCGCG GCACTGA 

 

Protein sequence

MTATKTAPDA PPQVGDLAAT PRLPGWATGT AAVLALVVAV VLVGAWHLTQ GTSDVGPREL 
LGLLTGSDGD VAVRNILVGS RLPRLAAGVS VGFALGVAGA LFQSISRNPL ASPDTLAVTA 
GSYLAIVAVA AFGLTVPFWA SGAVAFAGGL AAAALVLGLA GGAGAGGSRL VLAGAAVAMA 
LQAAVSALLI LFQTETTGLF AWGSGSLSQL DLTAFWRALP VVVIASTGGL LLSRRLDVLG 
LGDDTAGALG VPVRATRAIG VLLAVVLTAA AITLAGPIGF VGLAAPVVAR LLSRVVPALN 
RHAFLLPTAG LLGSLVVVLA DAVVRSLLGA QAALAVPTGV ATTMVGAVIM VLLARQLRDA 
GPTRRPPAAV GGPRSTRRFV LVLTSVAVLA VVVVVAGLLA GSTWLRTGDI ALWMQGEGPA 
VVRFALDERA PRVAAAVVAG AALALSGTMV QATARNPLAE PGILGITGGA GLGAVIVVTT 
VAGTAWGNGI AAGTGATLIA AVIGGMLAFA LVYLLAWRSG LLADRLVLVG IGLWNLTAAL 
TTFLLLRSDP WNTPRIYTWL SGTTYGRDFA EVLPLLVLLA LAIPLATSMP RELDLLALDD 
DTPQLVGIGL ERTRLLVLAA AAALAATSVT AVGVVGFVGL VAPHAARALV GGRHARVLPV 
AMLLGAVFLG LADLLGRTVI APAQLPAGLV VALLGAPYFV WLLARSRH