| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3000 |
|---|
| Symbol | |
|---|
| ID | 8650548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3330803 |
|---|
| End bp | 3332194 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_003327564 |
|---|
| Protein GI | 269957775 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.487438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCAGTG CGCGACGCGG CATGATCGCG TTCGCCGTCG TCGGCGCGGT CATGCTCGGC
GGGCACACCG CCGTCGGCGC CCCGCCCACC GACGACGACG TCGCCGCCGC GCAGGACGCC
GCCGACGCCG CCGCCCTCGA CGTCGCCGGG GCGCAGGCGC GGCTCGACCA GCTCCGCACC
GAGCTCGCCG CCGCCGAACG GGCCCTGCAG AGCGCCGGCG CCGACTACTC CGAGGCCCTG
GAACGTCTCG AGGTCGCCAC CGCGGAGGCC GACGACGCGA AGCGGGCCGT CGAGACCGCC
GGCGCGGCCG AGCGGGCCGC ACGGGCCCAG CTCGCCGAGG CCTACCGGAT CGAGGCGCGC
GGTGACGGGT TCGGCCCGCT GTCCGTGGTG GCGGGGGCCG GGAGCGTCGG CGACGTCGTC
GCGGACGGTG CCGCACGCCG GGCCGTCAAC CGCCGGGTGG CCACCGGCCT GGCCGCGCAC
GCCGACGCGC GCGCCGCAGC CGCCACCTCG GGCGCCCGGT GGGAGGCCGC GCGCACCGCG
CTCGACGCCG CGCAGGCCGA GGCGCACCGC GCGCTCGACG TCGCCGAGCA GACCTTCGCC
GGGCTCCAGA CACGCACCGC CGCCGCCGAG GCGGAGCGCG AGGTGCTCTA CGAGCACCTG
GCCGACCTGC GCAGCACCTC CGTGCGGCTC GAACGGCAGC GGCAGGCCGC ACGCGACGCC
GCCGCACGCG CGCAGGAGGA GGACGCCGCG CGCGAGCAGC GGGAGAACCC GCCGGTCGTG
GCGCCGACGG TGCCGGCGGT GCCGGTGCCT GAGGCCACGA CGGCGCCGTC TCCGGCGCCT
ACGCCGACTT CCGCGCCGAC TCCTGCGCCG ACTCCTGCGC CGGGTCCCGC TCCGGCCCCG
GTTCCCACCC CGACTCCGAC GCCCACGCCG ACCCCCGCGC CCGCGCCCAC CCCGACTCCC
ACCCCGACCC CGACGCCGAA GCCACCCGCT CCTCCGACGT CGGGCGTGAG CGTGGGCAGC
GCGGCGCAGG GGCAGCGGGC CGTCGCGTGG GCGCGCACGC AGCTGGGCGT GATGTACCAG
TGGGGCGGCA ACGGCAACCC CGGCTGGGAC TGCTCCGGGC TGACCGCGGC TGCGTGGCAC
GCGCAGGGCG TGAGCATCTC GCGCTCGTCG CGCTCGCAGT ACGCGACCGT CGGCAAGATC
CCCTACTCCC AGCTCCGGCC GGGCGACCTG CTGTTCTGGG CCGACAACCC CAACGACCCG
TCGACCATCC GCCACGTCGC GATCGCGAGC GGCAGCGGCC GCATGATCGA GGCGCCCCGC
CCGGGCCTCG CGGTCCGCGA GGTCCCGATC CGCTGGGACG GCGACCTCAT GCCGTACGCG
GGCCGCCCGT AG
|
|---|
| Protein sequence | MRSARRGMIA FAVVGAVMLG GHTAVGAPPT DDDVAAAQDA ADAAALDVAG AQARLDQLRT
ELAAAERALQ SAGADYSEAL ERLEVATAEA DDAKRAVETA GAAERAARAQ LAEAYRIEAR
GDGFGPLSVV AGAGSVGDVV ADGAARRAVN RRVATGLAAH ADARAAAATS GARWEAARTA
LDAAQAEAHR ALDVAEQTFA GLQTRTAAAE AEREVLYEHL ADLRSTSVRL ERQRQAARDA
AARAQEEDAA REQRENPPVV APTVPAVPVP EATTAPSPAP TPTSAPTPAP TPAPGPAPAP
VPTPTPTPTP TPAPAPTPTP TPTPTPKPPA PPTSGVSVGS AAQGQRAVAW ARTQLGVMYQ
WGGNGNPGWD CSGLTAAAWH AQGVSISRSS RSQYATVGKI PYSQLRPGDL LFWADNPNDP
STIRHVAIAS GSGRMIEAPR PGLAVREVPI RWDGDLMPYA GRP
|
|---|
| |