Gene Xcel_2987 details

Gene Information

• Locus tag: Xcel_2987
• ID: 8650535
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: -
• Start bp: 3315852
• End bp: 3317861
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 70%
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_003327551
• Protein GI: 269957762

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.832035
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATCA AGAAGATCCT CAGTGGCCCG ATCGTCTGGG TCGTCGTCGG CCTGGTCATC 
CTGGCCCTGG CCTGGAGTGC CGTGGCGACA CCGCGCACCC AACGCATCGA CCTGTCCGAG 
GGCCTCGACC TGCTCAGCAG CGGCCAGGTG CAGTCCGCCG TCATCACCGA CGGCGAGCAG 
CGCGTCGCGC TCGAGCTCAA GGAAGACCTC GTCTCCGACT CGGGGGAGAA CCTCGGCACG 
AGCGTCGAGT TCAACTACGT CGAGCCGCAG GGCACCCGGG TCGCCGAGGC GATCGAGGCC 
GCCGACCCAC CGGGCGGCTT CGACGCGCGC GTCCCGCAGC CGTCGATCTG GTCCTCGATC 
TTCGGCCTGG TGATCCCGTT CCTGATCATC GGCCTGGTGT TCTGGTTCCT CATGTCGCGC 
ATGCAGGGCG GCGGCAACCG GGTCATGGGC TTCGGCAAGT CGAAGGCCAA GCTCATCAGC 
AAGGACATGC CGCAGGTGAC GTTCGCCGAC GTCGCCGGGG CGGAAGAGGC CGTCGAGGAG 
CTCCACGAGA TCAAGGAGTT CCTCGCCGAG CCCACCAAGT TCCAGGCCGT CGGCGCCAAG 
ATCCCCAAGG GCGTGCTGCT GTACGGCCCG CCCGGAACCG GCAAGACGCT CCTCGCGCGC 
GCCGTCGCGG GCGAGGCGGG CGTGCCGTTC TACTCGATCT CCGGCTCCGA CTTCGTCGAG 
ATGTTCGTCG GCGTCGGCGC CTCCCGCGTG CGGGACCTGT TCGAGCAGGC CAAGCAGAAC 
GCCCCCGCGA TCATCTTCGT CGACGAGATC GACGCCGTCG GCCGCCACCG CGGCGCCGGC 
ATGGGCGGCG GTCACGACGA GCGCGAGCAG ACGCTCAACC AGCTCCTGGT CGAGATGGAC 
GGCTTCGACG TCAAGACGAA CGTCATCCTC ATCGCGGCCA CCAACCGCCC CGACATCCTC 
GACCCCGCGC TGCTGCGCCC GGGCCGCTTC GACCGGCAGA TCGCGGTCGA GGCCCCCGAC 
CTCAAGGGCC GTGAGGCGAT CCTCCAGGTG CACGCCAAGG GCAAGCCCAT GGTCCCGGCC 
GTGGACCTCG CCGCCGTCGC GCGCCGCACG CCCGGCTTCA CCGGTGCCGA CCTGGCCAAC 
GTGCTCAACG AGGCCGCGCT GCTCACCGCC CGCTCGGGCG CCCAGCTCAT CGACGACCGC 
GCGCTCGACG AGGCCATCGA CCGCGTCGTG GCCGGCCCGC AGAAGCGCAC CCGCGTCATG 
AACGTCAAGG AGCAGAAGAT CACCGCGTAC CACGAGGGCG GCCACGCCCT GGTCGCGGCG 
GCGATGCGCT ACACCGACCC CGTCACCAAG GTGACGATCC TGCCCCGCGG CCGGGCGCTC 
GGCTACACGA TGGTCATGCC GCTGGAGGAC AAGTACTCCA CGACGCGCAA CGAGCTGCTC 
GACCAGCTCG CCTACGCGAT GGGCGGCCGC GTGGCCGAGG AGATCGTGTT CCACGACCCC 
ACCACGGGCG CGAGCAACGA CATCGAGAAG GCGACCGCGA TCGCCAAGAA GATGGTCGTC 
GAGTACGGCA TGAGCGAGAA GGTCGGCGCC ATCAAGCTGG GCACGGGCAG CGGCGAACCG 
TTCCTGGGCC GTGACTACGG CCACCAGCGC GACTATTCCG AGGCCGTCGC CGGCACCGTG 
GACCACGAGG TGCGCAAGCT CATCGAGGGC GCCCACGACG AGGCGTGGGA GGTGCTCACC 
CAGTACCGCG ACGTGCTCGA CGACCTGGTG CTGCGCCTGC TGGAGAAGGA GACCCTCAAC 
CAGCACGAGC TGGCCGAGGT GTTCGCCCCC GTCGTCAAGC GCGAGGCCCG CGACGTCTGG 
CTGTCCTCCG AGCAGCGCAC CGTGCACACG CGCGGCCCCG TCATGACGGT CGCCGAGGCC 
AACGGCCACC CCGACGGCGT CGTCCCGCAG GACGAGGCCG TCACGGCACC CGAGCTGCCC 
TCGCAGCGCA CGGGCGAGGT CCCCGAGTGA 

 

Protein sequence

MNIKKILSGP IVWVVVGLVI LALAWSAVAT PRTQRIDLSE GLDLLSSGQV QSAVITDGEQ 
RVALELKEDL VSDSGENLGT SVEFNYVEPQ GTRVAEAIEA ADPPGGFDAR VPQPSIWSSI 
FGLVIPFLII GLVFWFLMSR MQGGGNRVMG FGKSKAKLIS KDMPQVTFAD VAGAEEAVEE 
LHEIKEFLAE PTKFQAVGAK IPKGVLLYGP PGTGKTLLAR AVAGEAGVPF YSISGSDFVE 
MFVGVGASRV RDLFEQAKQN APAIIFVDEI DAVGRHRGAG MGGGHDEREQ TLNQLLVEMD 
GFDVKTNVIL IAATNRPDIL DPALLRPGRF DRQIAVEAPD LKGREAILQV HAKGKPMVPA 
VDLAAVARRT PGFTGADLAN VLNEAALLTA RSGAQLIDDR ALDEAIDRVV AGPQKRTRVM 
NVKEQKITAY HEGGHALVAA AMRYTDPVTK VTILPRGRAL GYTMVMPLED KYSTTRNELL 
DQLAYAMGGR VAEEIVFHDP TTGASNDIEK ATAIAKKMVV EYGMSEKVGA IKLGTGSGEP 
FLGRDYGHQR DYSEAVAGTV DHEVRKLIEG AHDEAWEVLT QYRDVLDDLV LRLLEKETLN 
QHELAEVFAP VVKREARDVW LSSEQRTVHT RGPVMTVAEA NGHPDGVVPQ DEAVTAPELP 
SQRTGEVPE