Gene Xcel_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_2888 
Symbol 
ID8650435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp3208470 
End bp3210278 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative transcriptional regulator 
Protein accessionYP_003327458 
Protein GI269957669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGAGG ATGAGCTCGA CGCACTGCTC CGCGAACTGA GAGCTGTCAA GACCGATCAC 
CAGGCGGTCG AGGCGAAGCG TGCCGCGAAA GCACTCCCCG ACAGCACGCA CGAGACGCTC
AGCGCTTTCG CGAACTCCGA AGGCGGAACA CTGATCCTCG GCGTCGACGA GAGAAGCGGC
GAGTTCGTGG TCACCGGCGT CGTGAGCGCG CGCCAGACCC AGTCGGACCT CCAGTCCCTC
TGCGCACTGA TGGAACCGCC GCTGCGCGCC ACCATCGATC TCGTCGACCA CAGTGACGGC
ACCGTCGTGG TCGCCCGCAT ACCCGCCGTG CCCCGATCGC AGCGACCTTG TCACCTCGCC
TCCCTGCCGG CCGAGGACGG CTCGTTCGTC CGGGTCGGCG ACGGAGATCA GCGTCTGACG
GCCGACGAAG TCAGGTCGAT GCTCGCGGCC TCGGGGACGG CGGACCACTC CGCCATCGCC
GCCCCGGCGG GGAGCGAACT CGATCAACGC GCCGTGGACG GATTCCTTTC CGTTGTGCGG
TCGCTCAGCA GTCGCAACAA CTCGCTCGAC GACGCTGCGC TGCTCCGTCG ATGGCGGGTC
GTCGACGACC AGGGCGAGCC TTCCCTGGCA GGGGCGCTCA CTGTCGGCGA GTCACCTCAG
TCCCGCTGCG CGGCCGCTCG CGTGACCTAT CGGGTCTTAC CTCGCACCAC CGACCCAGTT
GGCACCCGGC ACTCCGGGCG TCATCTCGAG GGCACGGTCG GCGAGCTGCT CGACGACGCC
GTAGCTCTGC TGCGCGCAGA TCTCGGACAA GTTCAGGCCG TCCGCGAAGG GGAGGTCGTG
GACGTTCCTC CGGTGCCGCT GGAGGCGATC CGCGAGTATG TCTCGAACGC CTTGGTGCAC
CGGAGTCTCG CACCGCACTT GCGGGATCGC CATGTTCTCA TCGAGGTCAG CGAAGACGCG
GTAGTCATCG CCAGCCCTGG GAACCTCTTC ACCTCGACGG ACCCAGAGCT CTTGGGCCTC
TCTCCGATCT CCGGCGTACG CAACTTGACG CTCGTGCGCA TCAGCGAGCA GCTCCGCAGC
CCGCGAGGCG CGCGGATCGT CGAGAATCAG ACGTCGGGAA TCGAGGCGGC AGACCGCGCG
TGCCACATCG AGGGCACGAT GCCGGCGCTC TTCATCGATC GTCCCGACTC GTTCCAGGTT
CTTGTGCCCC GCGGTGTCAT GGATACCCGC GTCGCGCACA CGGCGGTGGG AGGCGGTCTC
GGTTCGCACC CTGCCGACCT GACTCGCCTC CTGACCGTCG CGACCCGGCT CGACGAACTG
CGCACCGTCT ATCCGGAACT GGGCGCGGTC GTCTTCGACG CAGCACTCGC CGCCCGCTCG
CTCGCGCCCT GCACGATCGA GACGGCTTCC GCGCGCCTGT CAGACCTCGA GGCCGCGGGC
GCCCTCCGTC GACTGACTGC GCGTCGCAGG CCGGTGTGGG CACCTGTTCC CGTCCTGCCC
AACAACGTCG GAGCCACGAC GATGCCGAGC AAGCGTACGA GAGACCGCGT GCCCGACCTC
ATCGCGGCCA TCGTCGCCGC ACCCGATGGC GTACTCACTC CGAGGCAGAT CGGTGACGCG
CTCGGACTCA CCTCCCCCAC CTCGCGAAAC CGCTGGATCA CCCGTGCGCG CGACAAAGGG
CTGATCCGGC CGACCAGCGA CAACCCCTTC GACCCCACCA TCGCGTACAA GGTGACCAGC
GCCGGCGTTC ACATCCTCGA TCGCGCGCAC CCGTCCGCCA GCCGGCGCCC ACGCCCGACC
GGGCGGTAA
 
Protein sequence
MREDELDALL RELRAVKTDH QAVEAKRAAK ALPDSTHETL SAFANSEGGT LILGVDERSG 
EFVVTGVVSA RQTQSDLQSL CALMEPPLRA TIDLVDHSDG TVVVARIPAV PRSQRPCHLA
SLPAEDGSFV RVGDGDQRLT ADEVRSMLAA SGTADHSAIA APAGSELDQR AVDGFLSVVR
SLSSRNNSLD DAALLRRWRV VDDQGEPSLA GALTVGESPQ SRCAAARVTY RVLPRTTDPV
GTRHSGRHLE GTVGELLDDA VALLRADLGQ VQAVREGEVV DVPPVPLEAI REYVSNALVH
RSLAPHLRDR HVLIEVSEDA VVIASPGNLF TSTDPELLGL SPISGVRNLT LVRISEQLRS
PRGARIVENQ TSGIEAADRA CHIEGTMPAL FIDRPDSFQV LVPRGVMDTR VAHTAVGGGL
GSHPADLTRL LTVATRLDEL RTVYPELGAV VFDAALAARS LAPCTIETAS ARLSDLEAAG
ALRRLTARRR PVWAPVPVLP NNVGATTMPS KRTRDRVPDL IAAIVAAPDG VLTPRQIGDA
LGLTSPTSRN RWITRARDKG LIRPTSDNPF DPTIAYKVTS AGVHILDRAH PSASRRPRPT
GR