Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_2867 |
Symbol | |
ID | 8650414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 3183144 |
End bp | 3184772 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | thiamine pyrophosphate protein TPP binding domain protein |
Protein accession | YP_003327438 |
Protein GI | 269957649 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGGTA AGACCGGCAA CCACAAGGTC GTCGAGCAGC TCCTGGCCGA CGGCATCACC CACATGTTCG GCAACCCGGG AACCGTGGAG CAGGGTCTCC TCGACGCGCT GCGCGACTAC CCGGAGATGC AGTACGTGCT CACCCTCCAG GAGTCCGTCG CCGTCCTCAT GGCCGACGGG CACGCCCGGG CCACGAAGCG CCCGGGCCTG GCCCAGATCC ACAGCTCCCC GGGGCTGGGC AACGCGATCG GCGCGATGTA CCAGGCGATG CGCGGCCACT CGCCCGTCGT CGTCATCGGC GGCGACGCCG GCGTCGGCTA CGCCAACCTG GACGCGCAGA TGGCCGCCGA CCTGGTGGGC ATGGCCCGCC CGGTCACCAA GTGGGCCACC GCGGTGCTCG ACGAGCGGTC GGTCCTGCGC ACGCTGCGGC GCGCGGTCAA GGTGGCCACG ACCGCGCCGA TGGGTCCCGT GTACGTCTGC CTGCCGGCCG ACGTGCTCGA CCGGCTCAAC CACGAGACCG TGTTCCCCTC CTGCCGGATC GTGCCGCCGG CCGCGCCGGC AGCAGAGACG GTCGCACGGA TCGCGGGCCT CCTGGCGCAG GCGCAGACCC CCGCGATCTT CGTCGGCGAC GGCGTCGCGT ACTCCGGCGC GCAGCCGGAG CTGGCGGAGC TGGCCGAGCT GCTCGGTGCA CCCGTGTGGG GCGTGGACTC CGGCGAGCTG AACCTGGACA CCACGCACCC CTGCTACCAG GGGCAGACCG GGCACATGTT CGGCGAGTCC AGCCTGCCGA TCACGAAGCG GGCCGACGTC GTCCTCGTCG TCGGCACGTA CATGCTCCCG GAGGTGTTCC CCGAGGTGGG GGACATCTAC CGCGACGACG CCGCCGTCGT GCACGTCGAC GCCGATCCGG ACGCGATCGC GAAGAACCAC CGGGTCGACA TCGGAGTCAC CGCAGACCCG AAGGCCACGC TGCGCGCGAT CGTCGACACG CTGCGGGCCT CGGTCGCGCC GGCGTGGGCG GTCGAGCACG CGGCCCGGTT CGAGGCGCTG CGCACCGGCC GCCGGGAGCC CGTCTCCGGG CGGTCCGTGG TCTACCGGGC CTTCCTGGAG GCGCTCGCCG CGCAGGTCGA CGACGACGTC GTGATCTTCG ACGAGGCGCT GACCGGATCG GACCTGCTGA CCCACTACCT GCCGCCCCGG ACGCCGGAAC GGTTCTTCCA GACGCGCGGA GGATCGCTCG GCGTGGGCAT TCCGGGCGCC ATGGCGGCAC AGCTCGCCTT CCCCGACAAG ACGGTCATCG GGTTCACCGG CGACGGCGGC AGCATGTACA CGATCCAGGC GCTGTGGACC GCCGCGCACT GTGCGATCCC CGCCAAGTTC GTGGTGCTCA GCAACCGCAC CTACGGCCTG CTCCAGAACA ACATCGACCA GTACTGGAAG ACGCAGGGAG TCGCGGCCCA CGAGTACCCC GACAGCTTCT CGCTGACCAA CCCCGACATC GACTTCGTCG CGCTGGCCAC GGGTCAGGGA GTCGACGCCG TGCGGGTCTC GACGCCGGAC GAGGCGCGAG CGGCAGCCGC CGCGATGCTC GCCAGCGACG GGCCCTTCCT CGTCGACGTC GTCATCTAG
|
Protein sequence | MAGKTGNHKV VEQLLADGIT HMFGNPGTVE QGLLDALRDY PEMQYVLTLQ ESVAVLMADG HARATKRPGL AQIHSSPGLG NAIGAMYQAM RGHSPVVVIG GDAGVGYANL DAQMAADLVG MARPVTKWAT AVLDERSVLR TLRRAVKVAT TAPMGPVYVC LPADVLDRLN HETVFPSCRI VPPAAPAAET VARIAGLLAQ AQTPAIFVGD GVAYSGAQPE LAELAELLGA PVWGVDSGEL NLDTTHPCYQ GQTGHMFGES SLPITKRADV VLVVGTYMLP EVFPEVGDIY RDDAAVVHVD ADPDAIAKNH RVDIGVTADP KATLRAIVDT LRASVAPAWA VEHAARFEAL RTGRREPVSG RSVVYRAFLE ALAAQVDDDV VIFDEALTGS DLLTHYLPPR TPERFFQTRG GSLGVGIPGA MAAQLAFPDK TVIGFTGDGG SMYTIQALWT AAHCAIPAKF VVLSNRTYGL LQNNIDQYWK TQGVAAHEYP DSFSLTNPDI DFVALATGQG VDAVRVSTPD EARAAAAAML ASDGPFLVDV VI
|
| |