| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2731 |
|---|
| Symbol | |
|---|
| ID | 8650276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3030987 |
|---|
| End bp | 3032612 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_003327303 |
|---|
| Protein GI | 269957514 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.299776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGCA TGCCCGCGAA GCCGTTCTAT CTGACGACGC CGATCTACTA CGTCAACGAC
GCCCCCCACA TCGGGCACGC GTACACGACC GTGGCGGCGG ACGTCGTCAC CCGCTGGCAC
CGGCAGCGGC AGGAGGACGT CTGGTTCCTC ACCGGCACCG ACGAGCACGG CGAGAAGGTG
CTGCGCACCG CGACGGCGAA CGGCGTCAGC CCGCAGGAGT GGGCGGACCG CCTGGTCGAG
TCGGCGTGGA AGCCCGTGCT CGAGACCCTC GACGTGCGCA ACGACGACTT CATCCGCACC
ACCGAGCCCC GCCACGAGTC GGCCGTGCAG GCGTTCCTGC AGGACCTGCA CGACAAGGGC
GAGATCTACC AGGGCTCCTA CGAGGGCCCG TACTGCGTGG GCTGCGAGGA GTACAAGCTG
CCCGGCGACC TGGTGGACGG CACGGGCGAG TTCGAGGGCC AGAAGGTGTG CCCGATCCAC
CTCAAGCCCG TCGAGATGCT CGCGGAGCAG AACTACTTCT TCCGGATGAG CGCGTACGCG
GACCGGCTGC TCGCGCTGTA CGAGGAGCAC CCGGAGTTCG TGCAGCCGGC GTCGGCGCGC
AACGAGGTCA TCGGCTTCGT CAAGCAGGGC CTGCAGGATC TGTCGATCTC GCGCTCCACG
TTCGACTGGG GCGTGCCGAT CCCGTGGGAC TCCCAGCACG TCCTGTACGT GTGGTTCGAC
GCGCTGCTCA ACTATGTGAC GGCGGTGGGC TACGGCTCGT CCGACGACGC GGAGCGGGCG
CAGCTCGACC GCCTGTGGCC GGCGAACGTG CACCTGGTCG GCAAGGACAT CCTGCGGTTC
CACGCCGTGA TCTGGCCGGC CATGCTCATG GCCGCGGGCC TGCCGCTGCC CCACCAGGTG
TTCGCGCACG GCTGGCTGCT GGTGGGCGGC GAGAAGATGA GCAAGTCCCG CCTGACCGGC
ATCGCGCCGA GCGACATCAT CGACACGTTC GGCTCGGACG CGTTCCGCTA CTACTTCATG
CGGACGATCG CGTTCGGCGG TGACGGCTCG TTCTCGTGGG AGGACATGGT CGCGCGGTAC
AACGGCGAGC TGGCCAACGG GTTCGGCAAC CTGGCCTCGC GCGTCGCGGC GATGGTGGGC
AAGTACTTCG GCGGCGTCTT GCCGACGGCG GGGGCGCGCA CGGGCCTGGA GACCGATCTC
GAGGCGGTGG CCGCCACGGC GGTGGCCGAC GCCGAGGCCG CCATCGACCG GCTCGCGATC
CACGACGCGC TCGGCGCCGT GTGGACGCTG GTCGACGCCG CGAACCTCTA CATCACCGAG
ACGCAGCCGT GGAAGGTCGC CAAGGAGCCG GGCGAGACCG ACGCGTCCGG CGCGGGCGTG
GACGGCGGCC GCCTCGCGAC GTCGCTGGTC ACGGCGGTCG AGGCGCTCCG GTCGCTGGCC
GTGCTGCTGC ACCCGGTGAC CCCCAAGGCG GCACAGGCCC TGTGGGAGCT TTTGGGCGCG
GACGCCGCGC TGGGTGCCCT GGACGCGCAG CCGGTGTCGT CGGCGGCGTC GTTCGGCGTG
CTCCCGGCGG GCACCCCGAT CACGAAGGGC GCGGCGCTCT TCCCCCGCCT GGACGAGACG
GCCTGA
|
|---|
| Protein sequence | MGRMPAKPFY LTTPIYYVND APHIGHAYTT VAADVVTRWH RQRQEDVWFL TGTDEHGEKV
LRTATANGVS PQEWADRLVE SAWKPVLETL DVRNDDFIRT TEPRHESAVQ AFLQDLHDKG
EIYQGSYEGP YCVGCEEYKL PGDLVDGTGE FEGQKVCPIH LKPVEMLAEQ NYFFRMSAYA
DRLLALYEEH PEFVQPASAR NEVIGFVKQG LQDLSISRST FDWGVPIPWD SQHVLYVWFD
ALLNYVTAVG YGSSDDAERA QLDRLWPANV HLVGKDILRF HAVIWPAMLM AAGLPLPHQV
FAHGWLLVGG EKMSKSRLTG IAPSDIIDTF GSDAFRYYFM RTIAFGGDGS FSWEDMVARY
NGELANGFGN LASRVAAMVG KYFGGVLPTA GARTGLETDL EAVAATAVAD AEAAIDRLAI
HDALGAVWTL VDAANLYITE TQPWKVAKEP GETDASGAGV DGGRLATSLV TAVEALRSLA
VLLHPVTPKA AQALWELLGA DAALGALDAQ PVSSAASFGV LPAGTPITKG AALFPRLDET
A
|
|---|
| |