Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_2702 |
Symbol | |
ID | 8650246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 2991114 |
End bp | 2995031 |
Gene Length | 3918 bp |
Protein Length | 1305 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | polysaccharide deacetylase |
Protein accession | YP_003327274 |
Protein GI | 269957485 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCACCA TCACCTCGCC GTGGACTTCG CACGCACGCT CCCGGAACCG CGGCGTCGCG ACGCTCGCCG TGCTCGCGCT CACGATCCCG GCCGCCGTCG CTGCCGCCGG GGAGCCGGAC GACGGTGACA TCGGCCCGGG GGACCAGGGC GTGGCTCCGG GGTTCGTCGT TCCTGAGAAC TTCGTCGACC AGATCCCCGA CGAGGCCATC GAGAACTGGG ACGAGAGCGT TCTCGACCTG CTCGCGGCGG CCGCCGTCGC GCCCGGCGAA TGGGCGTTCG ACGCGGCTCC GTCCCAGCTC GTCTACCGCA CCGTGGCGGG TCAGCCGTGC GCCGACGCGC AAGGGTTGTC GGTCGTCACG TGGGAGGGCG CCGAGCTCAG CTGGTCCGCG TCGGCGAGCG AGTCATGGGT GCACCTGTCC CAGTCGAGCG GTGTCACGCC TGCCCAGCCG TCGGTGACGG TGGACTGCGC CGGGCTCGGC GTCGGCGTGC ACCAGGCCAC GATCACGCTC ACGGACACCC CTGACGTCTC TGCCGACCAG ACGGTCCAGG TCGCGGTGGT TGTCAACCCC GGCGTTCCCG TCCAGGTCAC CACGTGGAAG GACGGTCACC GGGGAGCCTT CAGCTCGTCG ACCGACGACT CCCAGAACTC GGGCTTCACC GAGCTGCTCG CCAACGGCGT GGCAGGGACG TTCGTCATGA ACGGCACGGA GCCGCCCGAG GACTACGCGG CCATGTATGA CGCGGGCATG GAGATCGGCT CGCACCTCGT CAGCCACTAC TGCACGTTGG TGACCCCGCA GACGCTCACC GACGAGATCG AGGGCAACAT CCAGGGTGCC GCCGTGGCGA CCGGGTCCCT CGACGAGGTC TCCTCCCTCG TGTGGCCGTG CGGGTACCGC AACATCGAGT ACGGCGTCAT CGCCGCCGAC TACTTCCTGT CTGCACGCGG CTACAACATC AACGAGCTCG AAGACCCCAC GCCGTGGGAC TTCATGAACC TCAAGAGCTA CAACTCGCAC GAGCACGAGC CGTTCCCGCC CGCGGACCTG AAGTCGATCG CGGACGCTGC CCTGAGCGAG GGCAAGTGGG CCAACCTCGT GCTGCACAAC TTCACCAACG ACGACGGTGC GATCGCGTAC GCGACGACGA AGGACCTGTG GGTCGCCCCG ATCGGGACGG TGATCAAGTA CATCCTGCAG CGTGACCGGA CGGTCATCTC CGACTACGCC ACGACCGCCG ACGCGATCAC CTTCTCGATC GAGCGGCTCG GGCTCCCCGC GGTGGGCGAC CGTGATCCCG AGGCGCTCGT CAACCCGAGC GACACGGTGA CCTTCCAGGT GGACGTGACC GAGACGGGCC ACCCGCTCGA GGCCCGGATC GGCGACCAGC AGGTGCCCTT CGAGGTGCGC ACCGTGGACG GGCGCAGCTA CCTGTATCTG TCCGTGGCGC CGACGCGCGA AGCCCGCACC GTGACCATCA CGACGTCGCC GGACGCCCCG CCGGTCCTCC AGGTGGGGGC GAGCTCGCTG ACCTTCACCA CGAACGAGGG CGAGACGGTC GGCGACCAGA CGGTGGCCGT GTCCTTCACC GGGGGAGACG CCGTCGCGTG GACCGCCACC ACGACGGGCG ACGACGCCGG CTGGTTGTCG GTGACTCCGG CGTCCGGGAC CGGTGACGGG GAGATCGTCG TTCACGCCGA CACCGCAGGC CTTGCCGCGG GCACCCACCG GGGCACCGTC ACCGTCACGG CCGCGGGTGC TGCGGGCAGC CCGCGCGCGA TCTCCGTCAC CCTGACGGTC CGCGCGGCGG GAACCGAGCG ACTGACCCTG GACTTCGCGA ACCGTGCGGC GCTGGTGGCT GCGGGGTGGG ACTTCACGGC GCGGACGTCG TCGGGCTCGA ACCGGAACAC GGAGGTGTCC GGAGGGCTGA CGTACTCGGC GAACGGTCTT CAGGTGCAGG CCGGCGTGGG TGATCTGTGG GCGGGGCTGA ACAACACGCG CAACAGCCTG TTCCGGGATC TGCCGGCGGA CTGGGCGAGC GTCGAGGCGG AGCTGAGCTT TGCGCCGTGG GGCAACTACC AGCAGGCGGG TCTGGTGGTG TACGGCGACG ACGACAACTA CGTGCAGGTC ACCCGGAACT TCAACACAGG GTCCGGCGGG AACTCGATGG CGTTCGTCTC CGAGCAGCAG GGGCAGATCC TTGCGGAGCA GGCGGTGGCG ACATCGGCGA CGAGCCTGCG GCTGCGGCTG GTGCGGTCGG GGACGTCGAT CGCCGGGTCG TTCTCGGGCG ACGGCGGTCA GACGTGGGTG GCGCTGGGTA CCACGACGCG GTCGATCACT GCACCGCGGC TGGGTCTGAT CGTGGGTGCG AACGAGTCCG GTGGCACGCC TCCGGTCGCC ACGCTGCGCG AGGTCGTCGT CAACCCCGGC GGTTCCCCGA CGCCGACCCC GACCCCGACG CCGACCCCGA CGCCGACCCC GACGCCGACC CCGACGCCGA CGCCGACCCC GACCCCGACG CCGACGCCGA CCCCGACCCC GACGCCGACG CCGACGCCGA CGCCGGACGG TGGCGTCCTC CCGCTGGACT TCGCGAACCG TGCGGCGCTG GTGGCTGCGG GGTGGGACTT CACGGCGCGG ACGTCGTCGG GCTCGAACCG GAACACGGAG GTGTCCGGAG GGCTGACGTA CTCGGCGAAC GGTCTTCAGG TGCAGGCCGG CGTGGGTGAT CTGTGGGCGG GGCTGAACAA CACGCGCAAC AGCCTGTTCC GGGATCTGCC GGCGGACTGG GCGAGCGTCG AGGCGGAGCT GAGCTTTGCG CCGTGGGGCA ACTACCAGCA GGCGGGTCTG GTGGTGTACG GCGACGACGA CAACTACGTG CAGGTCACCC GGAACTTCAA CACAGGGTCC GGCGGGAACT CGATGGCGTT CGTCTCCGAG CAGCAGGGGC AGATCCTTGC GGAGCAGGCG GTGGCGACAT CGGCGACGAG CCTGCGGCTG CGGCTGGTGC GGTCGGGGAC GTCGATCGCC GGGTCGTTCT CGGGCGACGG CGGTCAGACG TGGGTGGCGC TGGGTACCAC GACGCGGTCG ATCACTGCAC CGCGGCTGGG TCTGATCGTG GGTGCGAACG AGTCCGGTGG CACGCCTCCG GTCGCCACCC TGCGCGAGGT CGTCGTCAAC CCCGGCGGTT CCCCGACGCC GACCCCGACC CCGACGCCGA CCCCGACGCC GACCCCGACG CCGACCCCGA CGCCGACGCC GACCCCGACC CCGACGCCGA CGCCGACGCC GACGCCGGAC GGTGGCGTCC TCCCGCTGGA CTTCGCGAAC CGTGCGGCGC TGGTGGCTGC GGGGTGGGAC TTCACGGCGC GGACGTCGTC GGGCTCGAAC CGGAACACGG AGGTGTCCGG AGGGCTGACG TACTCGGCGA ACGGTCTTCA GGTGCAGGCC GGCGTGGGTG ATCTGTGGGC GGGGCTGAAC AACACGCGCA ACAGCCTGTT CCGGGATCTG CCGGCGGACT GGGCGAGCGT CGAGGCGGAG CTGAGCTTTG CGCCGTGGGG CAACTACCAG CAGGCGGGTC TGGTGGTGTA CGGCGACGAC GACAACTACG TGCAGGTCAC CCGGAACTTC AACACGTGGT CCGGCGGGAA CTCGATGGCG TTCGTCTCCG AGCACGAGGG AGACATCCTC GACCAGGGCG CGGTGGTGAC GTCGGCGACG AGCCTGCGGC TGCGCCTGGT GCGGTCAGGG GCGGAGATCG CCGGGTCCTT CTCGGGCGAC GGCGGTCAGA CGTGGGTGGC GCTGGGCACC ACGACGCGGT CGATCGACGC TCCGCGGCTG GGTCTGATCG TGGGTGCGAA CGAGTCCGGT GGCACGCCTC CGGTCGCCAC CCTGCGCGAG GTCGTCGTCA CCAACTGA
|
Protein sequence | MATITSPWTS HARSRNRGVA TLAVLALTIP AAVAAAGEPD DGDIGPGDQG VAPGFVVPEN FVDQIPDEAI ENWDESVLDL LAAAAVAPGE WAFDAAPSQL VYRTVAGQPC ADAQGLSVVT WEGAELSWSA SASESWVHLS QSSGVTPAQP SVTVDCAGLG VGVHQATITL TDTPDVSADQ TVQVAVVVNP GVPVQVTTWK DGHRGAFSSS TDDSQNSGFT ELLANGVAGT FVMNGTEPPE DYAAMYDAGM EIGSHLVSHY CTLVTPQTLT DEIEGNIQGA AVATGSLDEV SSLVWPCGYR NIEYGVIAAD YFLSARGYNI NELEDPTPWD FMNLKSYNSH EHEPFPPADL KSIADAALSE GKWANLVLHN FTNDDGAIAY ATTKDLWVAP IGTVIKYILQ RDRTVISDYA TTADAITFSI ERLGLPAVGD RDPEALVNPS DTVTFQVDVT ETGHPLEARI GDQQVPFEVR TVDGRSYLYL SVAPTREART VTITTSPDAP PVLQVGASSL TFTTNEGETV GDQTVAVSFT GGDAVAWTAT TTGDDAGWLS VTPASGTGDG EIVVHADTAG LAAGTHRGTV TVTAAGAAGS PRAISVTLTV RAAGTERLTL DFANRAALVA AGWDFTARTS SGSNRNTEVS GGLTYSANGL QVQAGVGDLW AGLNNTRNSL FRDLPADWAS VEAELSFAPW GNYQQAGLVV YGDDDNYVQV TRNFNTGSGG NSMAFVSEQQ GQILAEQAVA TSATSLRLRL VRSGTSIAGS FSGDGGQTWV ALGTTTRSIT APRLGLIVGA NESGGTPPVA TLREVVVNPG GSPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPDGGVL PLDFANRAAL VAAGWDFTAR TSSGSNRNTE VSGGLTYSAN GLQVQAGVGD LWAGLNNTRN SLFRDLPADW ASVEAELSFA PWGNYQQAGL VVYGDDDNYV QVTRNFNTGS GGNSMAFVSE QQGQILAEQA VATSATSLRL RLVRSGTSIA GSFSGDGGQT WVALGTTTRS ITAPRLGLIV GANESGGTPP VATLREVVVN PGGSPTPTPT PTPTPTPTPT PTPTPTPTPT PTPTPTPTPD GGVLPLDFAN RAALVAAGWD FTARTSSGSN RNTEVSGGLT YSANGLQVQA GVGDLWAGLN NTRNSLFRDL PADWASVEAE LSFAPWGNYQ QAGLVVYGDD DNYVQVTRNF NTWSGGNSMA FVSEHEGDIL DQGAVVTSAT SLRLRLVRSG AEIAGSFSGD GGQTWVALGT TTRSIDAPRL GLIVGANESG GTPPVATLRE VVVTN
|
| |